Primulina huaijiensis: 140980233
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Entry
140980233 CDS
T11038
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phua03400
]
140980233
Enzymes [BR:
phua01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
140980233
DNA repair and recombination proteins [BR:
phua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
140980233
Prokaryotic type
140980233
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
DUF1331
Motif
Other DBs
NCBI-GeneID:
140980233
NCBI-ProteinID:
XP_073302057
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Position
7:complement(3725249..3729410)
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AA seq
489 aa
AA seq
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MSSSIPPVQPGRFRVLKQASDQKATGPVVYWMFRDQRLRDNWALIHAVIQANQRDVPVAI
AFNLFNQFKGAKARHFGFMLRGLRELHFRLRENLKIPFFLFQGEAVDTIPNFLEECGASL
LVTDFSPLREVQHWKDEICKRVNESVSVHEVDAHNIVPVWVASDKLEYGARTLRGKINKK
LPEYLIEFPELMSPKRKWASSSKDVDWENLIADAQRRGAEVPELEWCDPGEEAALEVLMG
KKNGFLTTRLKNYNSDRNNPLKPKGLSGLSPYLHFGKISAQRCALEARRVRKLCPEAVDA
FLEELIVRRELADNFCFYQPHYDSLQGAWQWARKTLMDHASDKREHLYTREQLEKAQTAD
PLWNAAQLEMVHFGKMHGFMRMYWAKKILEWTIGPEEALAISIYLNDKYEIDGRDPNGYV
GCMWSICGVHDQGWRERPVFGKVRYMNYAGCKRKFDVDGYIAYVKRITGECKKRKVEACL
ENNAKQLKS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcgattccccccgtccagccgggccgatttcgggtcctgaagcaagcttcg
gatcaaaaggcaactggtcctgttgtgtactggatgttcagagatcaacggctgagggac
aactgggctttgattcatgccgtcattcaggccaaccaacgagatgtaccagtggcaata
gcctttaatttgttcaatcagtttaagggtgccaaggctcggcatttcgggtttatgctc
aggggtctccgtgaattgcactttcgtcttcgagaaaatctgaaaataccttttttcttg
tttcagggtgaagctgtggacaccattccaaatttcctagaggaatgtggtgcgtcactc
ttggtaacagacttttcacctctgcgagaggttcagcattggaaagatgaaatatgcaag
agggtgaatgaatcagtatcagttcatgaagttgatgcacacaatatagtgcctgtttgg
gtggcatcggataaactggaatatggtgctaggactctaaggggcaaaataaacaaaaag
cttcctgaatatctgatcgagtttcccgaactcatgtctcctaaaagaaaatgggcttcc
tcgagtaaagatgtggattgggaaaacctcattgcggatgctcaaaggcgaggagcagaa
gttccagaactggaatggtgtgatccaggtgaagaagctgcactagaagtactaatgggg
aagaaaaatgggtttttgactacaagattgaagaattataactcagacagaaataatcca
ctcaaaccaaaagggctgtctggcctttccccgtatttgcactttggaaagatatcagca
cagcgttgtgccttggaggcacgcagagttcggaagctttgtcctgaggcagttgatgca
ttcttggaggaattgatcgttcggagagaacttgctgataatttctgcttctaccagcca
cattatgattcattacagggtgcatggcagtgggctcgcaagactttgatggaccatgcc
tctgataaacgggagcatttatatacgagagagcaattggagaaggcacagaccgctgat
ccgctttggaatgctgctcagttagaaatggttcattttggaaaaatgcatggtttcatg
aggatgtattgggcgaaaaagattcttgaatggactattgggccagaggaagctcttgca
atatcaatatatttaaatgataagtatgaaatagacggaagggacccaaatggttatgtt
ggatgcatgtggtcaatatgcggagtacatgaccaggggtggagagagcgaccagttttc
gggaaagtacgatacatgaactatgctgggtgcaagaggaaatttgatgtggatggctat
attgcttatgttaagaggataacaggtgaatgcaagaaaaggaaagtagaagcctgtctt
gaaaacaacgcaaaacaactgaaaagttga
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