Primulina huaijiensis: 140980511
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Entry
140980511 CDS
T11038
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
phua Primulina huaijiensis
Pathway
phua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
140980511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phua04131
]
140980511
Membrane trafficking [BR:
phua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140980511
Hops complex
140980511
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
TPR_30
Motif
Other DBs
NCBI-GeneID:
140980511
NCBI-ProteinID:
XP_073302463
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All DBs
Position
7:complement(18157027..18169415)
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AA seq
841 aa
AA seq
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MVGVALAAEWQLLYNRYYRKPELYQMQWRHVDLTRNKIACAPFGGPIAAIRDDTKIVQLY
AESALRKLRIYTSSGILISEAIWKNSGGRLIGMSWTDDLTLICITQDGTIYSYNIHAELL
STSSLGKECFDNSVVDCVFWGNGVVCINEAFEIFAVPEFKTPTTVVKMADCGLEELPLCM
AVIEPQYRNSGDVEVLLGVGDHVLSVEEDGVQELGAGVGPLQKMVVSRKGEFVASFTHDG
RLLVMSSDFSNVIIEYACESALPPDQLAWCGMDSVLLYWDDMLLMVGPYGDPVRYIYDEP
IILIPECDGVRILSNTSMEFLHRVPDSTVSIFQIGSTLPSALLYDALDHFDRRSAKADEN
LRLIRSSLPEAVEACVDAAGYEFDISQQRTLLRAASYGQAFCSHFQHDRIQETSKMLRVL
NAVRHVEIGIPLSIQQYKLLTPNILINRLINAHKHLLALRISAYLGMNQEVVVMHWACTK
ITTSSAISDASLLRMLLDKLKICKGISYAAVAAHADKSGRRKLAAMLVEDEPHSSKQIPL
LLSIGEEDNALVKATESGDTDLVYLVLFHMWQKKLPLEFFGTIQARPLARDLFVTYARFY
KHEFLKDFFLSTGQLQDVAFLLWKESWELAKNPMASKGSPLHGPRIKLIEKAQNLFAETK
EHTFESKAAEEHAKLLRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKTEFK
VSEKRWYWLKVFALATIRDWEALEKFSKEKRPPIGYRPFVEACIDAGEKAEALKYIPKLA
DPREKAEAYARIGMAKEAADAASQTKDSELLGRLKLTFSQNNAASSIFDTLRDRLSFQSI
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcgtcgcgttggcggcggagtggcagcttctctacaaccggtactatcgcaag
ccggagctctaccagatgcaatggaggcatgtcgacctcacgcgcaataaaattgcctgt
gctcctttcggcggcccgatcgcggccatccgagacgacaccaagatcgtacagctctac
gcagagtccgccctacgcaagctccgcatttatacctcttcgggtattctcatctcggag
gccatctggaaaaattcgggtggtcgtcttatcggcatgtcctggaccgatgacctaacc
ctgatttgcatcacgcaagacggcaccatttactcatacaacatccacgcggagttactc
agtacttcctcattaggaaaggagtgtttcgacaacagcgtcgttgattgcgtgttttgg
ggaaacggcgtggtgtgcattaatgaggcattcgagatttttgcagtgccggagtttaag
actccaactactgtggttaaaatggcagattgtggtttggaggagctgccgctttgcatg
gctgtaatcgagccgcagtatagaaattcaggtgatgtggaggtgttgttgggagttggg
gatcatgtgctgtcagtggaagaggatggagtgcaggaattgggagcaggagtggggcca
ttgcagaagatggtggtctccagaaaaggggagttcgtagcatcgttcacgcatgatgga
aggcttctggtcatgtcctctgatttttctaatgttattattgaatacgcttgtgagtca
gcgcttcctcctgaccaactagcttggtgcggaatggacagtgtcttactttactgggat
gacatgttattgatggtgggcccttatggcgatccagtacgctacatctacgatgagcca
ataattttgatcccagaatgtgatggtgtgcgaatactttctaatactagtatggagttt
ctgcatcgagtcccagactctacggtgtctatttttcagattgggagcaccttaccctct
gctttgttatatgatgctctggatcattttgaccggagaagtgccaaggccgatgaaaat
ttaagattgatccgctcttctctgccagaagctgttgaggcttgtgtcgatgctgctggt
tatgaatttgatatttctcaacagcgaacgctactgagagctgcgagctatgggcaagct
ttttgcagccattttcaacatgaccgaattcaagagactagtaaaatgctacgagtatta
aatgctgtgcgccatgttgagatcggtattcctcttagtattcagcaatacaagctgctt
acaccaaacattctgattaaccgtctgattaatgctcataaacaccttctagctttgcgt
atatcagcataccttggcatgaatcaagaagtcgtagtgatgcattgggcctgtacaaag
ataacaacatcttcagcgatatctgatgcaagtctcctacgaatgttacttgacaagctc
aagatatgcaaaggcatatcatatgcagctgttgctgcacacgctgacaaaagtggtcgt
agaaagttagctgctatgctagttgaagatgagccgcattcatccaaacagattcctctg
ctgctcagcattggagaagaagataatgcactcgtgaaggctactgaaagtggcgatact
gatcttgtttatcttgtcctgtttcatatgtggcagaagaaactacccctagagtttttt
ggaacaatacaagccagaccactagcacgtgatttgttcgtgacttatgcacggttttac
aagcatgaatttttgaaggacttctttctttccaccgggcaactccaggatgtagctttt
ctattgtggaaagagtcttgggaactagcgaagaatccaatggcaagcaagggatcccct
cttcatggtccacgtattaaattaattgaaaaggcccaaaatctttttgcagaaacaaag
gaacatacatttgagtctaaggcagcggaggaacatgcaaaattgttgaggattcaacat
gaattagaggtgactactaaacaggcaatttttgtggattcaagtatcagtgacacgatt
cgcacttgtattgtcctgggaaatcatcgggctgccatgaaagttaaaactgaatttaag
gtttcagagaagaggtggtattggcttaaagtctttgctttggcaacaatccgtgattgg
gaggcacttgaaaaattttcaaaagagaaaaggccacctattggttaccggccgtttgtg
gaggcatgtattgatgcaggtgagaaagctgaagctcttaaatatattccaaaacttgct
gatcccagagagaaagccgaggcttatgctagaattgggatggccaaggaagctgcagat
gccgcatcccagacaaaggatagcgaactgctaggccgtttgaaacttactttttctcaa
aataacgctgcttcctcaatttttgatactctgagagaccggttatccttccaaagcatc
tcttaa
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