Primulina huaijiensis: 140983611
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Entry
140983611 CDS
T11038
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phua Primulina huaijiensis
Pathway
phua00040
Pentose and glucuronate interconversions
phua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140983611
Enzymes [BR:
phua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140983611
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
140983611
NCBI-ProteinID:
XP_073306831
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Position
8:2746706..2748542
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AA seq
402 aa
AA seq
DB search
MKIPLFFVILLPLLLNAASILSSPVQDPELVVREVNEKINVSRRNLGFLSCSTGNPMDDC
WRCDPDWEKNRQRLADCTIGFGKHAIGGRDGKIYVVTDSGDDAVNPKPGTLRYGVIQNEP
LWIIFARDMVIKLKQELMLNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKQ
GGNAYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCTLSNCRDGLIDAIHGSTAITLSN
NYLTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSADPTINSQGNRFLAPDRVENKEVTKHEDAPESKWKQWNWRSEGDLMLNGAFFT
PSGAGASSNYAKASSLSARPSSLVSSMTDGAGALSCKKGKRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcccacttttctttgttatattacttcctttattattgaatgcagcttccata
ttatcttcaccagttcaagatcctgaactagtagtccgagaagtcaatgagaaaatcaat
gtatcaagaaggaacttgggatttctctcatgcagcacgggtaacccgatggacgattgc
tggcgttgcgatcctgactgggaaaagaaccgccagagactcgcggactgcaccattggg
tttggaaaacacgcaatcggtggaagagatggcaagatttacgtagtcacggactcgggg
gatgatgcagtgaatccaaagccaggaactttacgttatggtgtcatccaaaacgagcca
ttgtggatcattttcgcccgtgacatggtgatcaaactcaaacaagaactcatgttaaac
tcattcaaaaccattgatgggagaggagcaagtgtacacatagctggaggaccgtgcatc
accatacaatttgtaacaaatatcatcatccatggaataaatatacatgattgcaagcaa
ggggggaatgcgtatgttagggattcacccgagcattatggatataggacagtgtccgac
ggagatggggtgtcgatattcggggggagccatgtttgggtcgaccattgtacgttgtct
aattgtcgcgatggcctgatcgatgccatccacggctccacggctatcacgttgtcgaat
aattacttgactcatcatgacaaggtcatgcttttggggcatagcgatagttatacacaa
gataagaacatgcaagtaaccattgctttcaaccatttcggagaagggctcgtgcagagg
atgccaagatgcaggcatgggtattttcatgtggtgaataatgactacacacattgggaa
atgtatgcaattggtggcagtgcagatcctacaataaacagccaaggcaatagatttctt
gcaccagacagggtggaaaataaagaggtgaccaagcacgaggatgcacccgaaagcaaa
tggaagcagtggaattggagatcagaaggagaccttatgctaaatggggcattcttcact
ccatctggtgccggtgcctcgtctaattacgccaaggcatctagcttgagtgcgagacca
tcgtccctggtgagctcgatgaccgacggagccggtgcactcagctgcaagaaaggtaaa
aggtgctag
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