KEGG   Primulina huaijiensis: 140983759
Entry
140983759         CDS       T11038                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
  KO
K10752  histone-binding protein RBBP4
Organism
phua  Primulina huaijiensis
Pathway
phua03082  ATP-dependent chromatin remodeling
phua03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    140983759
   03083 Polycomb repressive complex
    140983759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phua03036]
    140983759
Chromosome and associated proteins [BR:phua03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     140983759
  Histone modification proteins
   HAT complexes
    HATB complex
     140983759
   HDAC complexes
    Sin3A-HDAC complex
     140983759
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     140983759
    PRC2.2
     140983759
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     140983759
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    140983759
  Chromatin remodeling factors
   NuRD complex
    140983759
   NuRF complex
    140983759
   NuRF complex (fruit fly)
    140983759
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 WD40_WDHD1_1st EIF3I WD_LRWD1 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EML ANAPC4_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N DUF6922
Other DBs
NCBI-GeneID: 140983759
NCBI-ProteinID: XP_073306989
LinkDB
Position
9:2612983..2615921
AA seq 394 aa
MEEVVEEEFSVWKKNTPLLYDLVICHSLEWPSLTVQWLPSLSQSGGGDLSVHKLILGTHT
SDDVPNFLMVAHAYLPRDPTSAIEVDPDNSVIPKAEVVQKIQVDGEVNRARCMPQNDAIV
ASKTNGTEVYVFDCTKQLLNTRNGCSDPDLRLKGHQKEGYGLSFSPSKEGYLLSGSNDCK
ICLWDISAMPQDKVLEAKYIYEGHDNVVEDVSWHSKNENLFGSVGDDCKLMIWDLRTNKF
QHSVIVHEKEVNYLSFNPFNEWVLATASSDTTVGLFDIRNLGSPLHALSSHMEEVFQVEW
DPNHETVLASSADDRRLMVWDINRVGDEQLEGEAEDGPPELLFSHGGHKAKISDFSWNKN
QAWVISSVAEDNTAQVWKMAESIYRDEDDIQTAD
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggaggaggtggtggaggaggagttctcggtgtggaagaagaacacgccgttgttgtat
gacctcgttatctgccactccctcgagtggccgtctctcacggttcagtggttgccgtcg
ctgtcgcagtccgggggcggtgatctgtccgttcataagttgattctggggacgcacact
tctgatgacgtccccaacttcctcatggtcgcgcatgcttaccttccccgggaccccacc
tctgcgatcgaagtcgaccccgataattcagttattccaaaggccgaggtagttcaaaag
atacaagttgatggagaagtgaacagggcccgctgcatgccacaaaatgacgctatagtt
gcttcaaagacaaatggtactgaagtatatgtgttcgactgtactaagcaattgttgaat
accagaaatggttgtagcgatcctgacttgagattgaagggacatcaaaaagaaggatat
ggtttatcatttagcccttctaaagaaggatatcttctgagtggttcaaatgattgcaaa
atttgcttgtgggatatttctgcaatgcctcaagataaagtacttgaagctaaatatatt
tacgagggccacgataatgtggtagaggatgtgtcatggcattccaagaatgaaaattta
tttgggtctgtgggagatgactgcaagctaatgatttgggacttacgcacaaacaagttc
caacactctgttattgtacacgagaaagaggtgaactatttatctttcaatccatttaac
gagtgggttttggccactgcttcctctgacactacagttgggctgttcgacatccggaac
ttgggttctccactgcatgctctcagcagtcatatggaggaggtatttcaggtagaatgg
gatcctaaccatgaaactgttcttgcatcttctgctgatgacaggagattgatggtttgg
gacattaacagagtgggagatgagcaattggaaggtgaagcagaagatggtcctcctgag
ctcctcttttctcatggtggtcacaaagcgaagatttccgacttttcatggaacaagaac
caggcatgggtcatttcgagtgtagcagaggacaatactgctcaggtgtggaaaatggca
gaaagcatctaccgagatgaggatgacatccaaactgcagattga

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