KEGG   Primulina huaijiensis: 140983766
Entry
140983766         CDS       T11038                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
phua  Primulina huaijiensis
Pathway
phua03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140983766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phua03021]
    140983766
Enzymes [BR:phua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     140983766
Transcription machinery [BR:phua03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     140983766
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 140983766
NCBI-ProteinID: XP_073306996
LinkDB
Position
9:complement(471306..479430)
AA seq 1207 aa
MGGSDFPKAGPSGVNEKFSNGTTRMDIFDDIDFVCSDSEDDDVGSSFQELDEGSLKTFCK
KASTAFFDQYGLISHQINSYNDFVKYGMQQLFDSIGEIVISPGYDPSKRRDDGWRQASLK
FGKVTLEKPMFWTGDKFSADGGKDYLNLLPRHARLQNMTYSSKIRVDARLEVFTENLASS
DKFKTGVQQQVEKTVLSVHQSDILFGSLPVMVKSDLCNEKGTEKMDCEFDHGGYFIIKGA
EKTFIAQEQMCLKRLWIAKDPNWSIAYRSVAKRKKVHVKLVPKVEHISGGEKILSVYFMA
TEVPIWILFFALGVSNDLEVVKLIDLDIEDCRVANVLVASIHVADKNYEGFRKADNAVNH
IKKLMQGCKFPPTESVEECFKNYFFPNLKSLGQKARFLAYMVKCLLEAYMGLHKVDSRDD
FRNKRLELASELLERELRVHIKHAERRMVKAMQRDLYGDREIQSIEHYLDTSIITNGLSR
AFSTGAWSHPYKKMERISGVVATLRRTNPLQATCDMRKTRQQVSYTGRAGDARYPHPSHW
GKICFLSTPDGENCGLVKNLASLGLVSTNVLEKDGLLRKLRQCGMENLVDDTSTSLKGKQ
KVLLDGDWVGVVENSAPFVVKLRRKRRRMEVPHQVEIKRDEHHCEVRIFADSGRILRPLL
VVRNLKKIKEVKGDYTFQTLLDNGIIELIGPEEEEDCQTAWGIRYLFTTEKSRLPVKYTH
CELDCSFLLGISCGIIPFTNHDHAKRVLYQSEKHSQQAIGFSTTNPNARVDTNSHQLYYP
QRPLFRTMLSDCLGKSSYSHQQRGMIPHPEFSNGQCAIVSVNVHLGYNQEDSIVMNRSSL
ERGMFRSEHIRSYKTEVESSEGLGKKLKPEDCISFGKTQSKIGRVDSLDDDGLPFIGANL
QTGDIVIGKHSESGVDHSIKLRHTERGMVHKVVLSANDDGKNFAVVSLGQVRSPCLGDKF
SSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLESALGKGIALGGA
LKHATPFSTPSVEDITAQLHRLGFSRWGHERVYDGRTGEAVRSLIFMGPTFYQRLTHMAE
DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANLHERLFTLSDSSQI
HICRSCKNVANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMGISL
KFDTELC
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgggtggatcggattttccgaaagctggacctagtggcgtcaatgagaagttttccaat
ggcaccaccagaatggatattttcgatgatatagactttgtatgttctgattctgaagat
gatgatgttggcagttcttttcaagaattagatgaagggtcgttgaaaactttctgtaag
aaggcttcgaccgccttttttgatcagtatgggctaattagtcaccaaattaattcatat
aatgactttgttaagtatgggatgcaacaattgtttgactctattggtgagattgttatc
tcgcctgggtatgatccatcgaaaaggagagatgatggttggaggcaggcgtctctcaaa
tttggaaaggtcacccttgagaagcctatgttttggactggcgataagttttcagctgat
ggtgggaaggattatttgaatttgttgccccggcatgcacgtcttcagaatatgacgtac
tcatccaagatcagagtcgatgctcgtcttgaggtttttacagaaaatcttgctagcagt
gacaagttcaagactggtgtacaacaacaagttgaaaaaacggtgctaagtgtgcatcaa
agtgacattctatttggcagcctcccggtaatggtgaaatcagatttgtgcaatgagaaa
ggaactgagaaaatggattgtgaatttgaccatggaggatattttattatcaagggtgct
gagaagacattcattgcacaggagcaaatgtgtctaaaaagactgtggatagccaaagat
ccaaattggtcaattgcatatcgctcagttgccaaacgaaaaaaagttcacgtaaagtta
gttccaaaagtggagcacatcagtggaggagagaagatcctttcagtttactttatggca
actgaagttccaatctggattctgttctttgccttgggtgtttcaaatgacctagaggtt
gtaaagttgatagatctggacatcgaagactgcagggttgcaaatgtacttgttgcatca
attcatgttgctgataaaaattatgagggtttccgtaaggcagacaatgcagtaaatcac
atcaagaaactcatgcagggttgcaaattcccaccgacagagtccgtggaagaatgcttt
aaaaattatttcttccctaacctcaaaagcttggggcagaaggctcggtttctggcatac
atggtaaagtgtctgttagaagcttacatgggacttcacaaagttgacagcagggatgat
ttcaggaacaagaggttggagttggctagcgagctacttgagagagaattgagagttcac
ataaaacatgctgagaggcgcatggtgaaagccatgcaaagggatctttatggagatcgg
gagatacagtcaattgaacactacttggatacttcaataatcacgaatggtctttccaga
gctttttctactggagcttggtcacatccttacaagaagatggagagaatttctggtgtt
gtggctactctaagacgaacaaatcctttgcaagcaacttgtgatatgaggaaaacacgc
cagcaggtttcatacacagggagggctggtgatgctagatacccccacccatctcactgg
ggtaagatttgcttcctttctacacctgatggagaaaattgtggactagttaagaatcta
gcaagcttgggtcttgtcagcactaatgtattggaaaaggatggtcttcttcgaaaatta
cgccagtgtggaatggaaaatttggttgatgatacttcaacatcgctcaaagggaagcaa
aaggttttgttagatggagattgggttggagtggttgaaaattctgcgccatttgttgtt
aagctaagacgtaaacgtcgcaggatggaagtgcctcatcaggttgaaattaagagagat
gagcatcattgtgaagtgcgcatatttgctgattccggaaggatactccggcctctttta
gttgttcgaaatctaaagaagattaaagaagtaaaaggagattatacatttcaaactcta
ttagataatggaataatagaactaattggaccagaagaagaagaagattgccagactgca
tggggaattagataccttttcaccactgaaaaatctaggctacctgtgaaatatacacac
tgtgagttagattgttcgttcttgttagggataagctgtggaattatccctttcacgaac
cacgatcacgcaaaaagagttctctaccagtctgagaagcactctcagcaagcaattgga
ttttctacgacaaatccgaatgccagagttgatactaattctcatcagctgtattacccc
cagaggccacttttccggacgatgctttctgattgtctcggaaaatcatcatattctcat
cagcaaaggggaatgatcccacaccccgagttctctaatggccagtgcgcgatcgtgtct
gttaatgtccatctgggatacaaccaggaggactcgattgtgatgaatcgttcatccctg
gagcgtggaatgtttcgatctgaacatattagaagctacaagacagaggttgagagctcc
gaaggattagggaaaaagcttaagcctgaggattgtataagctttgggaaaacacagagt
aaaattggacgggtagacagccttgacgatgatggccttcccttcattggtgccaacctc
caaacaggcgacatagtcataggaaagcattctgaatcgggggttgatcacagtattaag
ctgcgacacactgaaagagggatggttcacaaagtcgttctttctgctaatgatgatgga
aagaactttgccgttgtatctctaggacaggttcgttctccatgtcttggtgacaagttc
tcgagtatgcatggacagaagggtgttcttgggtttctggagtcgcaagaaaacttccct
tttacgaaacaaggaatagtcccagacattgtgataaatcctcacgcatttccctcccga
caaactcctggtcaacttttagagtccgccttgggcaaggggattgccctggggggtgca
ctaaaacatgccaccccattttcaacaccatcagttgaagatattacagctcaacttcat
aggcttggattttcaagatgggggcatgaaagagtttatgatggtcggactggagaagca
gttcgttccctgatttttatgggcccaactttctaccagcgcctcactcacatggccgaa
gataaagtgaaatttaggaatacagggccagtccatccacttacccgccagccagttgcg
gataggaagcgatttggtgggataaaattcggtgagatggaacgcgactgtctattagct
catggtgcagctgcaaatttacacgagcgcctcttcaccctgagtgattcctctcagatc
cacatctgccgcagctgtaagaacgtggccaacgtaattcagcgcccagtttttggtggc
cggaagattcgtggtccctattgtcggttctgtgagtcggtggaagatgtagtgagggtc
aacgtcccatatggagcgaagcttctctgtcaggagctgttcagtatgggaatctctctc
aagtttgataccgagttgtgctga

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