Primulina huaijiensis: 140983793
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Entry
140983793 CDS
T11038
Name
(RefSeq) squalene synthase 2-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
phua Primulina huaijiensis
Pathway
phua00100
Steroid biosynthesis
phua00909
Sesquiterpenoid and triterpenoid biosynthesis
phua01100
Metabolic pathways
phua01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
140983793
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
140983793
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
phua01006
]
140983793
Enzymes [BR:
phua01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
140983793
Prenyltransferases [BR:
phua01006
]
Terpene biosynthesis
Squalene/phytoene synthase
140983793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
140983793
NCBI-ProteinID:
XP_073307033
LinkDB
All DBs
Position
9:complement(2086652..2094171)
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AA seq
414 aa
AA seq
DB search
MGSLLAIWQHPDDLYPLVKLKLAARNAEKQIPSEPHWGFCYSMLHKVSRSFALVIQQLDT
DLRDAICIFYLVLRALDTVEDDTSIATKVKVPILMSFHRHIYDRDWHFSCGTKDYKVLMD
EFHHLSTAFLELGSSYQEAIEDITMRMGAGMAKFICKEVETIDDYNEYCHYVAGLVGLGL
SKLFHASGKEDLASAALSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWNKYVDKL
EDLKYEDDSVKAVQCLNDMVTNALSHAEDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC
YNNIQVFRGVVKMRRGLTAKVIDRTKAMPDVYGAFYDFSRMLKFKIDDNDPNARKTKDNL
EVILKICRDSGTINERKSYVIQNKPQYNTATFVIFFIIIAILVSYLSATRATTV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgcttgcgatttggcagcatccagacgatttatatccgttggtgaagctg
aagttggcggcgaggaatgcggagaagcagattccgtcggagccacactggggattttgc
tactctatgcttcacaaagtttcgagaagttttgctctcgttattcagcagctcgatacc
gatcttcgtgatgcaatatgcatcttctatttggttctccgagctcttgatactgtcgag
gatgatacaagcatagcaacaaaggttaaagtaccgattttgatgtcttttcaccgtcac
atatatgaccgtgattggcatttttcatgtgggactaaggactacaaggttctcatggat
gagttccatcatctgtcgacggcttttctggagcttggaagcagttatcaagaggctatt
gaggatattaccatgagaatgggcgcaggaatggcaaaatttatatgcaaggaggtagaa
acaatagatgattataatgaatattgtcactatgtggctggacttgtcggattaggattg
tcaaagcttttccatgcgtcgggaaaagaagatcttgcttcagctgctctctcgaactcg
atgggtttgtttcttcagaaaacaaatattatcagggattatctggaggatatcaatgag
attcccaaatcaagaatgttttggcctcgccaaatttggaataaatatgttgacaaactc
gaggacttaaaatatgaagacgattcagttaaagcagtgcaatgcctgaatgacatggtc
acaaatgctttatcacatgctgaagactgcctgaaatacatgtctgctttgcgggatcca
gcaatctttcgattttgtgcaattccacagataatggcaatagggactctagctttgtgc
tacaacaacattcaagtattcagaggtgttgtgaaaatgagacgaggtctcactgccaaa
gttattgaccgaactaaggccatgccagatgtgtatggagccttttatgatttctctcgt
atgctaaaatttaagattgatgacaatgatcctaatgctagaaagacaaaagacaactta
gaagtgatcttgaagatttgcagggactcgggaaccataaatgaaaggaaatcttacgtg
atccagaacaagccccaatataatactgctacgtttgttatcttctttatcataattgcc
attctcgtatcatacttatctgctactcgagctactaccgtctga
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