Primulina huaijiensis: 140984269
Help
Entry
140984269 CDS
T11038
Name
(RefSeq) protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
phua Primulina huaijiensis
Pathway
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140984269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phua03041
]
140984269
Spliceosome [BR:
phua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140984269
Complex C
U5 SnRNP specific factors
140984269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
Suf
TPR_19
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_16
TPR_17
TPR_2
TPR_8
TPR_CcmH_CycH
TPR_1
TPR_9
FAT
PMC2NT
Motif
Other DBs
NCBI-GeneID:
140984269
NCBI-ProteinID:
XP_073307651
LinkDB
All DBs
Position
9:complement(5968164..5972327)
Genome browser
AA seq
945 aa
AA seq
DB search
MQAPVPPKTRLDFLSSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSASAIGAPA
GPSGVGRGRGKGPGEEDEEEENEEKGYDENQKFDEFEGNDAGLFASAEYDDEDKEADAVW
EAIDKRMDSRRKDRREARLKEEIEKYRASNPKITEQFAELKRKLYTLSADEWDSIPEIGD
YSLRNKKKRFESFVPVPDTLLEKARQEKEHVSALDPKSRAVGGTETPWAQTPVTDLTAVG
EGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAEVSDINKARLLLKSVTQT
NPKHPHGWIAAARLEEVAGKIPAAQQMIKKGCEECPKSEDVWLEACRLASHVDAKAVIAR
GVKAIPNSVKLWMQAAKLEQDDANKSRVLRKGLENIPDSVRLWKAVVELANEEDARLLLQ
RAVECCPLHVELWLALARLETYENAKKVLNKAREKLSKEPSIWITAAKLEEANGNTAMVG
KIIERGIRALQREGLEIDREVWMKEAEAAERAGSIATCQAIIHNTIEVGVEEEDRKRTWV
ADAEECKKRGSIETGRAIYSHALTVFLTKKSIWLKAAQLEKSHGTRESLDALLRKAVTYI
PHAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERARML
LAKARERGGTERVWMKSAIVERELGNTSEERRLLDEGLKLFPSFFKLWLMLGQLEERLGN
LEQAKETYELGLKHCPNSIPLWLSLANLEEKVNGLSKARAVLTMARKKKPQNPELWLAAV
RAESRHGHKKEADILMAKALQECPTSGILWAASIEMVPRPQRKTKSMDAFKRCSDNPHVL
AAVGKLFWHDRKVDKARSWFNRAVTLAPDIGDFWVLYYKFELQHGTEDMQRDVLSRCIAA
EPKHGEKWQSISKAVENSHLPTESILKKVVVAVGKEEHLADNGKN
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctcctgtacctcccaagaccagattagacttccttagctccaaaccacccccg
aattatgtcgccggactgggccgtggtgccactggatttaccacgcgttctgatattggt
ccagcccgagctgcacctgacttacctgatcgatcggcctcagcgattggagcacctgcg
gggccttcgggtgtcggaaggggtcgtgggaagggccctggtgaggaggatgaggaggaa
gagaatgaagagaaggggtacgacgagaatcagaagtttgatgagtttgaggggaatgat
gcgggactgtttgcatctgctgagtatgatgacgaggataaagaggcggatgcggtatgg
gaggctattgataagagaatggattcgcgtaggaaagataggagggaagctaggcttaag
gaggaaattgagaagtatcgagcttcgaaccccaagattacagaacaatttgcagaattg
aagaggaagctgtacaccttgtcagctgatgagtgggatagtatacctgaaattggggat
tattctttgaggaataagaagaagaggtttgagagttttgtcccagtgccggatacgctg
ttggagaaggcgaggcaggaaaaggagcatgtaagtgccttggatccgaaaagtagggct
gttggcggaacagaaactccttgggcacagactcctgttacggatttgactgccgttggt
gaagggagaggaacagtgttgtctctgaagttagacagattatctgattcggtctcgggg
ttgacagttgtggatccaaagggttacctgacagatttgaagagtatgaagattactagt
gatgcagaagtatccgatataaataaagctaggttgttacttaagtcggtgacacagaca
aatcccaagcatccacatggttggattgctgcagccaggttggaggaggtggcagggaag
attccggctgctcagcagatgatcaagaaagggtgtgaggaatgtccaaagtccgaggat
gtttggttggaggcttgccgtctggcgagccatgttgatgccaaggctgtaattgctagg
ggtgtgaaggcgatcccaaattcagttaagttgtggatgcaggctgcaaagctggagcag
gatgatgcgaataagagtagggttctgagaaaagggctcgagaatattccggattcagtg
aggctttggaaggcagtcgtggagcttgcaaatgaggaagatgcgaggctgttgctgcag
agggcggtggaatgctgccccttgcatgtggaactttggctagcgcttgctagattggag
acttatgaaaatgcaaagaaggtgttgaataaagcaagagagaagctttctaaggagcca
tctatatggatcactgctgctaagttagaagaagctaatgggaatactgctatggttggg
aaaattattgaaaggggtattcgagctttgcagagggaaggcctggaaatcgacagagaa
gtgtggatgaaagaagcggaggctgctgaacgagctggttccatcgcaacttgtcaggct
attattcacaacaccattgaggttggagtagaagaagaggatagaaagaggacctgggtt
gctgatgctgaggaatgcaagaagagaggttctattgagactggaagggcaatctactcg
catgcccttactgtctttttgaccaagaagagcatatggcttaaagcagcacagcttgaa
aagagccatggaactagggagtctcttgatgctctactgcggaaggcagttacttacata
ccacatgctgaagttctatggctaatgggtgccaaagaaaagtggcttgctggtgatgtg
cctgctgctcgagcgattcttcaggaagcgtatgcagcaattcccaattctgaggaaata
tggcttgctgcattcaagcttgaatttgagaaccatgaaccagaaagagctagaatgctt
cttgcaaaagccagagaaaggggagggaccgagagagtctggatgaaatcggcaatcgtt
gagagagagttgggaaacacttccgaggagaggagattacttgatgaagggttaaagctc
ttcccttcatttttcaaactctggttgatgctggggcagttggaggaacgattggggaac
ctagaacaagcaaaggaaacatatgaattgggccttaagcactgccccaattctattcct
ttgtggctttcccttgcaaacctggaggaaaaagtaaatggtctgagtaaggctcgtgct
gttctgaccatggccaggaagaagaaaccccagaatcctgaactctggcttgctgcagtg
cgggctgagtctcgacacggtcacaagaaagaagctgatattttgatggcgaaggcattg
caggaatgcccgactagcgggatcctctgggctgcttcaatcgagatggttcctcggcct
cagagaaaaaccaagagcatggatgcattcaaaagatgttccgacaatccccatgtcctt
gcagcagtgggaaagttattttggcatgacagaaaagttgacaaagcaaggtcttggttc
aaccgagcagttactcttgctcctgatattggggatttttgggttttgtactacaaattt
gaactccaacatggtacagaagacatgcagagggatgtattgagcagatgtattgctgca
gagccgaagcacggcgagaaatggcaatccatatcaaaggctgtggagaactctcatctg
ccgaccgagtcaatcttgaagaaggttgtagttgctgtaggaaaagaagagcatttagct
gacaatggcaagaactag
DBGET
integrated database retrieval system
