Primulina huaijiensis: 140984278
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Entry
140984278 CDS
T11038
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
phua Primulina huaijiensis
Pathway
phua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140984278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140984278
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140984278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
CCDC-167
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
140984278
NCBI-ProteinID:
XP_073307660
LinkDB
All DBs
Position
9:22223551..22240336
Genome browser
AA seq
2044 aa
AA seq
DB search
MPSFLSDEEFQRLSHDASLVANKADVFIREIYNQLETVKAEADAAAITAEQTCSVIEQKY
VALTAELSALQSQHSELITALDKRDLELGQLQSNKQQFLLQSVEKDGLIERLKLEVSELH
KSKRQLMDILGQKDLEISEKNATIKSYLDKIVNLTEIGASKEAHQADLESELARLNATTS
RLLQEKELLERHNSWLNEELTAKVDDIIQLRKENRELEADMSSKLADAVSEYKLSADSLK
LHKDKVSELEEKLASMEEELLSTKKEAAAAEQHFTAEISTVTKLLDLYKESSDEWSKKAG
DLEGVIKALETHLNQVEDEHKERLGKEEFTMKQMEMELDELKEKLQTSEAELERLRKENE
LKHPSLSDFTANSWMNLVDTGELVEDDRAIVPKIPGGVSGTALAASLLRDGWSLAKMYAK
YQEAADALLHEELGRKQTQAILERVLYEIEEKARVIMDEREEHERLVEAYSALDQKLQHS
LSEHSALETNIRELKASLKRQERDRAVAQKEIVQLQKQVAVLLKECRDVQLRCGYVAYDD
EMITVPVQLNAESDAESILSVRLLTFKDINGLVEQNSQLRSLAHDLSQQIEKKEAELKEE
YEMELQKHTADAASKVNAVLQKAEEQGQMIESLHASVAMYKKLYEEGELKLRTAYRLPME
TAPELGSQKVIQLRESSLESSSKIPEQAFERVKSLEEELSKSKSDLISLRAECDKLSLEA
RFSKEKLARFMKEFEHQREEHNRVIARNVEFSQLIVDYQRKVRESSDSVNDSNKLTQKLT
MEVSILKHEKEILQNSEKRAFDEVRSLSERVHRLQASLDTIQSTQEVREEAKSIERRKQE
EYVKKIEQEWAEAKRELQQERDNARNIAFERESTLNSAFRQVEELRKELASALQSVAAVE
LRAAVAEARCADSMKIMEPSRVKDSDSVEGDPSSSASEKILANFREEIENLRGEARSSKD
HMLQYKSIAQVNEAALKQMELAYENFRTEANDVRKSLEAELLSLKGQAEELENECKLKTE
EAISASARNEEALTGALLEISSLKEDCSVKMSQILLMESQFSTLKEDLEQEHQRWLSAQA
NYERQVILQSETIQELTKTSQALASFQDEVSELRKVADVLRNENNELKSKWETEKLALEV
YKNVADSKYNEVNELNKILHSRLEALHIKSAEKERGIASGSTSQNSTDDDGLQNVMNYLR
RSKEIAETEISLLKQEKLRLQSQLESVLKSAEDAQTSLQSERAKSRSSLFTEEDFKSLQL
QVRELTLLRESNAQLREENRHNFEECQKLREALQKDKNEIGNLEKLLRSRETDLEACRKE
IDMQKMEKVHLEKRINELVEKCRDVDVNDYNHLKESSQLMQSNLREKDAQIEELKKKMSE
KQDSASHLEQELAMCRTELNERDGKISELLQSEASLKSEAEKHKRLNIQGRRKFENLLKE
KEDQIKEMQAQVKQLEDAKQAKRNLGDSAGEQALKEKEKEKDSRIQTLERALERHREELK
KEKEDHLKEKEKSQKIRKTILDSREIVEQQKIKLTDELRNHKEALKALQDEVEKLKNSGG
SQSESTSVVQQFSSTILDEMSSAYFQAVENFEQVVQPACDELESASAKDAPAPYLENTSA
VGASTGQSIALVSQIPSASASNVASKTLEEKERRFGLGKANARTARKLVRPNITKPKEPQ
GDVDMSEAYEINPLSSSQNAETQENATLPTAPLVRKRSSASILSDGQEMPVSEEAIPDMV
APVVKKAKGSESLQDGGEEKPASPSKLIEVVLTEESSDDVVNIRQSVNEELVDAEKDEFE
NVEEQIEEPTVDEQIQADPANEAGAGEVADEKSDKPSEAVQSPELLRDQIEQDIQQIVTE
FGSDVEEGEMVADLADNDGDSYIPGSRQLPAEQSVEPENSPGMEPFIPVTFDVGEIDPPL
TPEEKNDGGDVIGNIVESSDKLNDGSDTGGETDQFSGAVTTTTEEASTNSNVDPVASEQG
DTGGKPVSPLNSSSTTINLQERARERGHLRQLGRNTSSSSRPHTRVVRVRGNRGGRNGRG
QPRG
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtttctgtctgatgaagaattccagcggctatctcacgacgcctcactggtg
gcgaataaggcggacgttttcattcgagaaatttacaatcaacttgaaaccgttaaggca
gaggctgatgccgcagccattacagcagagcaaacttgctccgtaattgaacagaaatac
gttgctcttacagcggagctttccgccctccaatcacaacactccgaactcatcacagcc
cttgataaacgtgatcttgaattggggcaactacaatccaacaagcaacaattcctcctc
cagtctgttgaaaaggatgggttgattgaaagattgaagctggaggtatcggagctccat
aaatcaaagaggcaattgatggacatcctggggcagaaggatttggaaatcagcgagaaa
aatgccaccattaagagctatcttgataagattgtcaacttgactgagatcggggcatca
aaagaagcacatcaagctgacctagaatctgaattggcgcgattgaatgctacaacatcc
cgccttttacaggaaaaggagcttcttgagaggcataattcatggctaaatgaggagtta
acggccaaggtggacgatatcatccaactgaggaaagagaacagggaacttgaggcagat
atgtcttccaagcttgctgatgctgtaagtgaatataaactgagcgctgattctttgaag
ttgcacaaggataaagtgagtgaattagaggagaagcttgcatccatggaagaggagtta
ctgtcgactaagaaggaagctgcggcagcagagcagcattttacagccgaaatttcaact
gttaccaaactcctggatctgtacaaggaaagttctgacgaatggtcgaaaaaggctggg
gatcttgagggtgtcattaaggctttagaaactcatttaaatcaagtggaagacgaacac
aaggagaggcttgggaaggaagagtttacaatgaagcaaatggaaatggaattggatgag
ttgaaagagaaacttcagacttctgaggcggagctagaacgtttgaggaaagaaaatgag
ctaaagcatccttctctgagtgattttacagctaattcatggatgaacttggttgatacc
ggtgaattggttgaggatgaccgagcaattgtaccaaagattccgggtggggtttcagga
acagcgttagcagcttcactccttagggatggatggagtctggccaaaatgtatgccaaa
tatcaagaagctgctgatgcactgcttcatgaggaactgggaagaaagcaaacacaagct
atcttggagcgggtactttatgaaattgaagaaaaagctagggtcatcatggatgaacga
gaggaacacgaaagattggttgaagcttactccgctcttgaccaaaaactgcagcattcc
ctatctgaacattctgctttggaaacaaatattcgagagctgaaggctagcttgaagagg
caagagcgtgatcgtgctgttgctcagaaggagatagttcaacttcagaagcaggtggct
gttcttctgaaggaatgtagagatgttcagttgcgttgtggatatgttgcctatgatgat
gagatgattactgttcctgtgcagttgaatgctgaatcggatgctgaaagtattttatct
gtgaggctgttgaccttcaaggatattaatggattagttgaacaaaattcccagctgcgg
agcctcgctcatgacctttcacaacagattgagaaaaaagaagcagagttaaaggaagag
tatgagatggagcttcagaaacatacagcagacgctgcatctaaagttaatgcggtgttg
caaaaagctgaggaacagggacagatgattgaatcacttcacgcctctgtggcgatgtac
aagaagttgtatgaagagggagaacttaaacttcgcacggcttatcgtctacccatggaa
acagcaccagaacttggaagccagaaggtcatacagttaagagaaagcagtcttgaatca
tcaagtaagataccagaacaagcttttgagcgtgtgaaaagtcttgaggaagagttatca
aaatccaagagtgacctaatatcacttcgagctgagtgcgataagctgtctctggaagca
cgattttccaaagaaaaactggccagattcatgaaggaattcgagcatcagagagaagaa
cataatagagtcatagctagaaatgttgaattctctcagctgatagttgactatcagagg
aaagtacgtgaaagttccgattctgtaaatgactccaataaacttacccagaagttaaca
atggaggtctcaatattgaagcatgaaaaggaaatactgcagaactctgagaagagagct
tttgatgaagttcgtagtttgtcggagagggttcaccgtttgcaggccagtttggatacc
atacaaagcactcaggaagtccgtgaggaggctaaaagtattgagaggaggaagcaggaa
gagtatgtaaaaaaaattgagcaagaatgggctgaggcaaaaagggagcttcaacaagag
cgagataatgctcgaaatattgcattcgagcgtgaaagcaccttgaatagtgcctttaga
caagttgaagaattaagaaaagaattggccagtgcattgcaatccgtagctgctgtggag
ttgagagctgctgttgcagaggctcgttgtgctgattcgatgaagattatggaaccttct
agagtgaaggattctgactctgtcgaaggtgatccatcctcttctgctagtgaaaagatt
ctggcaaacttccgtgaggaaattgagaatttgagaggggaggcacggtctagcaaagat
cacatgcttcagtataagagcattgctcaggtaaatgaagcagccctcaaacagatggaa
ttggcctatgaaaattttagaactgaggccaatgatgtgagaaaatctcttgaagccgag
cttctttcacttaaagggcaagccgaagaacttgaaaatgaatgcaaattgaagactgag
gaggcaatttctgcatccgctaggaatgaagaagctcttactggtgctttattggaaatt
tccagtctgaaagaagattgctcagttaaaatgtcacaaatcttgttgatggaatcacaa
ttctctactctgaaagaagatttggagcaggagcatcaacggtggctttctgcccaagcg
aattatgaaagacaggttattctacagtcagaaacaatacaggagttgactaaaacatca
caggcattggcttcatttcaagatgaagtatctgagctccgcaaagtggcagatgtgctg
agaaatgagaataatgagctgaagtcaaaatgggagacagaaaagttagctctggaagtt
tataagaatgtggctgatagtaaatacaatgaagtcaatgagctgaacaagatcttgcac
agtcgccttgaagccttgcacatcaaatcagctgagaaagaaagaggaatagcttctgga
agcacttcccagaatagtactgatgacgatgggttgcaaaatgttatgaattatctccgg
cggtcaaaggaaatagccgaaacagagatttctttgttgaaacaagagaagcttcgattg
caatcacagctagagagtgttttgaagtcagcagaggatgcacaaacatcacttcagtca
gagagagcaaaatctcgatcctcattattcacggaggaagacttcaaatctctccaactt
caggttagagagctgacactacttcgggagagcaatgcacagctcagagaggaaaaccgg
cataattttgaagaatgtcagaaactccgtgaagcattacagaaggataagaatgaaatt
gggaatttggagaaacttcttcgaagcagagaaactgatttggaagcttgtagaaaagaa
attgatatgcagaagatggaaaaggtgcatcttgaaaagagaattaatgagttggtagaa
aagtgcagggatgttgatgttaatgattacaatcacttgaaagaatcttctcagctgatg
cagtcgaatttaagagagaaggatgcacaaatcgaagaacttaagaaaaaaatgtccgag
aaacaagattcagcgtcacatttagaacaggagcttgccatgtgcagaacagaattgaat
gagagagatggcaagattagtgaactcttgcaatctgaggcttcactcaaatctgaggct
gaaaaacataagcgattaaatattcagggaaggaggaagttcgaaaacctgttgaaggag
aaggaagatcaaatcaaagagatgcaagcgcaggttaaacaattagaagatgccaagcag
gctaaaagaaatttaggggattctgcaggcgaacaagctctgaaagaaaaagagaaggag
aaagactccagaatacagactttggagagggcgttggagaggcacagagaggagttgaag
aaggagaaagaagaccatctcaaagaaaaagaaaaaagtcagaaaattcgtaaaacaatt
cttgactctcgtgagattgtcgagcagcagaagattaagctcacagatgagctaaggaat
cacaaggaagctctgaaagcgctccaagatgaagtagagaaactaaagaactctggaggc
agtcaatctgagagtacatctgtggttcaacaattttccagtacaattttggatgaaatg
tcatcggcatacttccaggctgtagaaaattttgaacaggttgtgcaaccagcttgtgat
gaacttgaatctgccagcgctaaagatgctccggctccctatctcgaaaatacgtcagct
gttggagcttcaactggtcagtcgatagcgttagtgtcccaaattccatcagcttccgct
tctaacgttgcttcaaaaactttggaagagaaagagagaagatttggtttaggaaaggcg
aatgctagaacagcaaggaaactggtccgtcctaatattacgaaacctaaagaacctcaa
ggtgatgtggacatgtcagaagcatacgagattaatcccttgtcatcttcgcagaatgca
gaaactcaagaaaatgcaaccctaccaacagcaccgcttgtgcggaagcgctcatcagca
tcaattttatctgatgggcaggagatgcctgtttcagaggaagcaatccctgatatggta
gctcctgtggtgaaaaaggcaaaaggttcggagagcctacaagatggcggtgaagaaaag
cctgcctctccttcgaaacttattgaggttgtactcactgaagaatcatcagatgatgtg
gtaaacattcggcaaagtgttaatgaggaactggttgatgcagaaaaggatgagtttgaa
aatgtagaggagcagattgaagagccaacagttgatgaacagattcaggcagatccagcg
aatgaagcaggagcgggtgaagttgcggatgagaaatcggacaaaccaagtgaggctgtc
cagtctccggagctattgagagatcaaattgaacaagacatccagcaaatagtaacagaa
tttggctctgatgtggaagagggagagatggttgcagacttggcggataatgatggtgat
agctatatcccaggatctagacaacttccggctgagcaatcggtagaaccagaaaattca
ccaggaatggaaccctttattcctgtaacctttgacgtcggggagattgatcctcccctg
actccagaggagaagaatgatggcggtgacgtgattggaaatattgttgaaagttcagat
aagcttaatgatggaagcgatacaggtggagaaactgatcagttttctggggctgtaact
accaccacagaggaagcatcaactaacagtaatgtagatcctgtggcttctgaacaaggt
gatactggagggaaaccagtatcacctctgaatagcagctcaactactattaatttacag
gagagggcaagggaaaggggacatttaagacagttaggcagaaacacttcttcctcgagc
cgacctcataccagagtagttcgtgttcgtggtaatcgtggcggccgcaatggacgagga
caaccacgtggttag
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integrated database retrieval system