Primulina huaijiensis: 140984324
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Entry
140984324 CDS
T11038
Name
(RefSeq) phytochrome B-like isoform X1
KO
K12121
phytochrome B
Organism
phua Primulina huaijiensis
Pathway
phua04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
140984324
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
HATPase_c
HisKA
GAF
PAS_9
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
140984324
NCBI-ProteinID:
XP_073307738
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Position
9:complement(4583017..4587996)
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AA seq
1154 aa
AA seq
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MSASGSRPTKANNPQYSQAQAQAQAQEQAQSSGRGSYGRHAKNSHNDSGRNRGGDSMSKA
VAQYTVDARLHAVFEQSGESGKSFDYSQSVKASTQSVPEQQITAYLSRIQRGSHIQPFGC
MISVDEFSFRVIAYSENAVEMMGLMPQSVPSLEKPEILTFGTDVRALFTPSSSVLLERAF
GAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARNEDPALSIAGAVQSQKLAV
RAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKGPGLEPYI
GLHYPSTDIPQASRFLFKQNRVRMIVDCRATPVRVVQDEALVQSLCLVGSTLRSPHGCHA
QYMANMGSIASLTLAVIINGNDEDGVEGRNSMRLWGLVVGHHTSARCIPFPLRYACEFLM
QAFGLQLNMELQLASQFSEKRVLRTQTLLCDMLLRDSPTGIVMQSPSIMDLVKCDGAALY
YQGKYYPLGVTPTEAQIKDIIAWLLAFHGDSTGLSADSLADAGYSGAAALGDAVCGMAVA
YITSRDYLFWFRSHTAKEIKWGGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENA
EMDAIHSLQLILRDSFQHAVGSSSEEVVHAEVKDMELKGMDELSCVAMEMVRLIETATAP
IFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVHDLVLKESEEIADKLLLNALRGEEDK
NVELRLRIFGADHQNEAVFLVVNACSSKDYTNNVVGVCFVGQDITELKVVMDKFIHIQGD
YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWNRQDVVGKMLVGEVFGNCCRLKG
PDTLTKFMIVLHNAIGNQDTDKFPFSFFNKNGKYVQALLTANKRVSIDGQIIGAFCFLQI
ASPELQQALSVQRQQEMKCDSKMRELAYICHEIRNPLSGIRFSNSLLEATNLTEDQKQLL
DTSAACEKQMLKIMKDVNLENIENGSLELEKAEFVIGSVIDAVVSQVMLFLRERGLQLIR
DIPEEVKTLAVHGDQFRIQQVLADILMNMARYAPSPEGWVEIQLSPTLKWISEGITTVHI
EFRIVCPGEGLPPELVQDMFSSRWVTQEGLGLSICRRILKLMNGEVQYIRESERCYFLIV
LDLPMPKRGLKIVG
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatcggggagcagaccaacgaaggcaaataatccgcagtattcacaagcacaa
gcacaagcacaagcacaagaacaagcgcaatcttcaggtaggggaagctatggccgccat
gctaaaaattctcataatgattctggcaggaataggggaggcgattccatgagtaaggct
gtagcgcagtacacggtggatgcgagacttcatgctgtttttgagcaatctggtgagtcc
ggaaaatcttttgactattcccagagtgttaaggcctcgactcagtctgttcccgagcag
cagatcactgcttatttgtcgagaatacagcgcggtagccatattcaaccatttggttgt
atgataagcgtggatgaatttagttttcgagtgatagcttattcggaaaatgctgtggaa
atgatgggcttgatgcctcagtcggtccctagccttgaaaaaccagaaattcttaccttt
gggactgatgtcagagctctgtttaccccctcgagctctgttttgctggagagggcattt
ggggcgagagagatcactctgttgaatcctatttggattcattctaagaattctgggaaa
ccgttttatgcaattttacatagaatagacgttggaatagttattgatttagaacctgcg
aggaatgaggatccagccttgtcgattgctggggccgtccagtcacagaagctcgctgtg
agggcaatttctcatttgcagtcgcttccaggtggggatatcaagcttttgtgtgacacg
gttgttgagagcgtgagggacctcacagggtatgatcgtgtgatggtttataagtttcac
gaagatgaacatggcgaggttgttgcagagagcaaggggccgggtttagagccttatatt
ggtttgcattatccttccacggacattccccaggcttcaagatttttgtttaaacagaat
agggttcggatgattgtggattgccgtgccacgccagttagagtcgtccaggacgaagca
ttagttcagtccttgtgtttagtaggctcaactctcaggtctcctcatggttgccatgcc
caatacatggctaacatgggttcgattgcatcattgacattggctgttataattaacgga
aacgatgaagatggtgttgaaggaagaaactctatgaggctgtggggcttggttgttggc
catcacacttctgctcgatgcattcccttcccacttcgttatgcttgtgaattcctaatg
caggcatttgggcttcagctgaatatggaattacagctggcatcacagttctcggagaaa
cgagttttaaggacccagactctgttgtgtgatatgttacttcgagattcacccactgga
attgtcatgcagagccctagtatcatggacctggtcaagtgtgacggtgctgcactgtac
taccagggtaaatattaccctctgggtgtcactcctaccgaagcgcagataaaggatatt
atcgcatggctcttggcatttcacggggattcgactggtttgagcgctgatagtctagct
gatgctggatattctggggctgctgctctaggggatgctgtctgtggaatggctgttgca
tatattacttcaagggattatctgttctggttccgttcccataccgcaaaagagatcaaa
tggggtggggcaaagcatcatcctcaagacaaagatgatggacagaggatgcatcctcgc
tcctcgtttaaagcatttctagaagttgtcaagagccgaagtttgccatgggagaatgca
gaaatggatgcaattcactcgttgcagctaattttaagagattcatttcaacatgctgtt
ggaagcagttctgaggaagttgtgcatgctgaggttaaggacatggaattaaaaggcatg
gatgaactcagttgtgttgccatggaaatggttaggttgatagagactgccactgctcct
atatttgctgtagatgttgatggccgcataaacgggtggaatgcaaaagtctcggagtta
actggactacctgttgaagaagcaatgggaaagtccttggttcatgatcttgtactaaaa
gagtcggaagaaattgcggataaacttctccttaatgctctaagaggtgaggaagataag
aatgtagaattaaggctaaggatatttggtgctgaccatcaaaatgaagctgtatttttg
gtggtcaatgcttgctctagcaaggactatacaaacaatgtagtgggtgtatgttttgtt
ggtcaggacattactgagctgaaagtggtgatggacaaattcatccacattcaaggtgat
tataaggcaatcgtacacagtcccaaccccctgattccacctatatttgcttcggatgag
aacacttgttgctctgagtggaacactgctatggaaaagctcactgggtggaataggcag
gatgttgtagggaagatgctagttggggaagtatttggcaattgctgtcggcttaagggt
cccgatactttgacgaagtttatgattgtcttgcacaatgcaattggcaaccaggatact
gacaaattcccattttctttttttaacaaaaatgggaaatatgtgcaagctctcttgacc
gcaaacaagagggtgagtattgatggccagataattggagccttttgcttcttgcaaatt
gcaagtcctgaactgcagcaagctttgagtgtccagaggcaacaggaaatgaagtgtgat
tcaaagatgagagagttggcttatatttgccatgaaataagaaatccactgagtggaata
cgattcagtaactctctcttggaagcaacaaacttgacagaagaccaaaaacagcttctt
gatactagtgctgcttgtgagaagcaaatgctaaagattatgaaggatgtcaatcttgaa
aacattgaaaatggttctctggagctcgagaaggcagaatttgtaattgggagtgtgata
gatgctgtggtcagccaagtaatgttatttctgagagagagaggtctgcaattgatccgt
gacataccagaggaagtcaagacactggccgttcatggtgaccaatttagaattcaacag
gtcctggctgatattttaatgaacatggcacgctatgcaccctctcccgaaggttgggtg
gagatccaactttctccaactctgaaatggatttctgaaggaataaccactgtgcacatt
gaattcaggatcgtatgcccaggtgaaggacttccacccgaacttgtccaagacatgttc
agcagccgatgggtgacccaagaagggctaggactgagcatctgccggagaatattgaag
cttatgaatggagaagttcaatacatcagagaatcagaaagatgctatttccttattgtt
cttgatctgcctatgccaaagagaggcttgaagatcgttggctga
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