Primulina huaijiensis: 140984419
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Entry
140984419 CDS
T11038
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
phua Primulina huaijiensis
Pathway
phua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
140984419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phua04131
]
140984419
Membrane trafficking [BR:
phua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140984419
Hops complex
140984419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_5
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
140984419
NCBI-ProteinID:
XP_073307923
LinkDB
All DBs
Position
9:complement(7572522..7577390)
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AA seq
960 aa
AA seq
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MYQWRKFEFFEEKKSRIPDEVEGGIQCCSSGRGKIVLGSENGTVSLLDRGLQLQYSFQAH
SSSVLFLQQLKQRNILVTVGEEEQIPPQQSVTCLKVFDLDKRVEEGPSSPSPDCVQILRI
FTNQFPAAQITSFLVFEETPPIIFIALGLDNGCIYCIQGDFARERIKRSKLEVDSGHFDK
KQFSITGLGFRVDGQAFQLFAVTPSSVSLFNLQNQPPNRQTLDHIGSSTIGVALSDRSEL
IIGRHEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVITDHRTGKNTFNIYDLKNHLI
AHSIVVQDVSHMLCEWGSIELIMADKSALFIVEKDMESKLDMLFKKNLYTVAINLVQSQQ
ADAVATAEVLRKYGDHLYGKQEYDEAMAQYILTIGHLEPSFVIQKFLDAQRIYNLTSYLE
KLHEKGLASKDHTTLLLNCYTKLKDVEKLNIFIKSEDGAGEHKFDVETAIRVCRAANYHE
HAMYVAKKAERHEWYLKILLEDLGRYDEALQYINSLEPSQAGVTVKEYGKILIEHKPRET
NEILMRLCTEEGELTKRGFSNGTFLSMLPSPVDFLNIFVHHPQSLMEFLEKYTDKVKDSP
AQVEIHNTLLELYLTRVLEFPSLSQTAISENSDHRTGRVSHAPAISNVASNGRINLIQNN
VDEDKDLHERHQKGLLLLKSAWPSEQEQPLYDVDLAIILCEMNSFKEGLLYIYEKLKLYK
EVISCYMQAHDHEGLIACCKRLGNLDKGGSPSLWADLLKYFGELGEDCSKEVKEVLTYIE
RDDILPPIIVIQTLSRNPCLTLSVIKDYVARKLEQESKLIDENRTAIEKYQEETSAMRKE
VHDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEIECPECAPEYRAVLD
MKRSLEQNSKNQDRFFQQVRTSKDGFSVIAEYFGKGIISKTSTETSDAFHTTKSYSNGNF
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggaggaaattcgaattcttcgaggagaagaaaagccggattccggacgaa
gttgagggaggaattcagtgctgctccagcggcagaggtaaaattgtattgggttccgag
aacggcaccgtttcgctgctcgatcgtggcctccagcttcaatactcctttcaagctcac
tcatcctctgttctcttcctccagcaactcaagcaaaggaacatcttagtgacagttgga
gaggaggaacaaataccaccacaacaatcagttacatgcctaaaagtatttgacctcgat
aaaagggtagaagaggggcccagttcaccgagtccagattgtgtccaaattctgcggata
tttaccaaccaatttcctgcagcacagatcacatcctttttggtttttgaggaaactcca
cctatcatattcattgcccttggattggacaacggttgtatttattgcatccagggtgac
tttgcccgtgaacgcattaaacgctccaagcttgaggttgatagcggtcattttgacaaa
aaacaattttctattacgggattgggattccgagtggatggtcaggcctttcagctattt
gctgtcactccaagttcagtgagtttgtttaatttgcaaaatcaaccacccaacaggcaa
actcttgatcacattggatcttcaacaatcggtgtagcattaagtgatcgctcggaatta
atcatcggcaggcatgaagctgtctatttttatgaagttgatggtcgaggcccttgttgg
gcttttgagggggaaaaaaagcttcttggttggtttcgtggttaccttttatgtgttatt
acagatcatagaactggtaagaatactttcaacatctatgatctgaagaaccacttaata
gctcacagcatagtagttcaagacgtttctcacatgctgtgtgaatggggtagtatagaa
ctcataatggcagacaaatcagctctttttattgtcgaaaaggatatggagagcaagctg
gatatgcttttcaagaaaaatctttacactgtagctattaatcttgtccagagccagcaa
gctgatgctgtggcaactgctgaagttctgaggaaatatggtgatcatttatatggaaaa
caagagtatgatgaagcgatggctcagtatatccttactattggccatctcgaaccttcg
tttgtcatacagaagtttttggatgctcagaggatctacaacctgactagttacttggaa
aagttgcatgaaaaaggccttgcttccaaagatcatactactctcttgctaaactgttac
acaaaactgaaagatgtcgagaagttgaatatattcattaaaagtgaggatggtgcaggg
gaacataaatttgatgtggaaactgctatacgggtctgtcgtgcagccaattaccatgag
catgcaatgtatgtagccaagaaggctgaaagacacgaatggtatcttaaaattttactt
gaggacctaggtaggtatgatgaagctctgcaatatataaatagccttgaaccaagtcaa
gctggggtcactgttaaagagtatggaaaaattctgatagagcacaagccaagggaaaca
aatgaaatactgatgagactttgcaccgaagagggggaactgaccaagaggggtttctca
aatggtacctttttatccatgctgccatctcctgttgattttctcaacatttttgtgcat
cacccacagtctcttatggaatttcttgaaaaatataccgacaaagtgaaggattcacct
gctcaagtggaaatccataataccctgttggagttatacttaactcgagtcttggaattt
ccatctctttcacaaactgccataagtgagaacagtgatcatagaacgggtagagtgtca
catgcacctgcaatttcaaacgttgcatcaaatggaaggataaatttgattcagaacaat
gtagacgaggataaagatctccacgagaggcatcaaaaggggctactcttgcttaaaagt
gcatggccatctgaacaggagcaaccgctgtatgatgttgatcttgcaattattctctgt
gaaatgaactcttttaaagaagggctcttatatatttacgagaagctgaaattatataaa
gaagtgatttcctgctatatgcaagcgcatgatcacgagggtttaattgcatgctgcaag
agactaggaaatttggataagggtggtagcccatctctttgggcagatctattgaagtat
tttggtgaacttggtgaagattgctccaaagaagttaaagaagtcttgacatatatcgaa
agggatgacatcttgcctccaattatagttatccaaaccttgtctagaaatccatgcctc
actctttctgtaattaaagattatgtagctcgaaagctggaacaggagtcgaagctgatt
gatgagaatcgaacagctattgaaaagtatcaggaggaaacatcggcgatgagaaaagaa
gtccatgatctcagaacaaatgcaagaatcttccagcttagcaagtgcacagcctgcact
ttcaccctagaccttcctgcagtccatttcatgtgcatgcactcattccaccagcgttgc
ttaggcgacaatgaaatagaatgccccgagtgcgctcctgaataccgagctgttttagac
atgaagaggagcttggagcagaactcgaaaaaccaagatcgtttctttcagcaagtcaga
acttcaaaggatggtttttcggtgattgcagaatatttcgggaaagggatcatcagcaaa
actagcactgaaacttccgatgcttttcatacgacgaaaagttattcaaatggtaacttc
tga
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