Primulina huaijiensis: 140984635
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Entry
140984635 CDS
T11038
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
phua Primulina huaijiensis
Pathway
phua03013
Nucleocytoplasmic transport
phua03015
mRNA surveillance pathway
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140984635
09122 Translation
03013 Nucleocytoplasmic transport
140984635
03015 mRNA surveillance pathway
140984635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140984635
03041 Spliceosome [BR:
phua03041
]
140984635
03009 Ribosome biogenesis [BR:
phua03009
]
140984635
03012 Translation factors [BR:
phua03012
]
140984635
Enzymes [BR:
phua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140984635
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140984635
mRNA cycle factors
Stress granule specific factors
140984635
Spliceosome [BR:
phua03041
]
Complex C
Other components
EJC/TREX
140984635
Ribosome biogenesis [BR:
phua03009
]
Eukaryotic type
90S particles
Helicases
140984635
Translation factors [BR:
phua03012
]
Eukaryotic type
Initiation factors
eIF-4
140984635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
NAT10_TcmA_helicase
Utp25_C
TniB
StrH_N
CMS1
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
140984635
NCBI-ProteinID:
XP_073308287
LinkDB
All DBs
Position
9:complement(701177..705227)
Genome browser
AA seq
408 aa
AA seq
DB search
MAAPAVQRGGGGRRAMGEDDANLVFETSKGVEPILSFDEMGIKDDLLRGIYNYGFEKPSA
IQQRAVLPIISGRDVIAQAQSGTGKTSMIALAVCQIVDTKSSEVQALILSPTRELAAQTE
KVILAIGDYINIQAHACIGGKSVGEDIRKLEHGVQVVSGTPGRVCDMIKRRTLRTRSIKL
LILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEITSKFMSDPVRILVKR
DELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTAKMRENNFT
VSSMHGDMPQKERDAIMQEFRSGQTRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH
RIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccggcggtacagagaggaggcggggggcggcgagctatgggggaggacgac
gcgaatctggttttcgaaacatccaagggtgtggagccaattttgagcttcgatgagatg
gggataaaagatgatttactcagaggcatctacaactacggattcgagaagccctcggct
atacagcagcgagctgtgcttccaataatctccggccgtgacgtcatagctcaggcgcag
tctggtacgggaaagacttccatgattgcccttgctgtttgccaaattgtcgacaccaag
tcctccgaggtccaggctttgatattgtctcctacaagagagctggctgctcagactgag
aaagtaattttggctattggtgactatattaatattcaggcacatgcttgtattggaggt
aaaagtgttggcgaggatattagaaaattagaacatggagttcaagtggtgtcagggaca
cccggaagagtttgtgacatgattaagaggagaactctgcgaaccagatccataaaattg
ttaattctcgatgaatctgatgaaatgctgagtcgaggttttaaggatcagatttatgat
gtttaccgatatcttcctccagaactccaggttgtattgatatctgcaacccttccaaat
gaaatacttgagatcacaagcaaattcatgtctgatccagttcgtattcttgtaaaacgt
gatgaattgactctggagggcatcaaacaattctttgttgcagtagagagagaagaatgg
aaatttgatactctctgtgatttgtatgacacccttaccattactcaggctgttattttc
tgtaacacgaagaggaaggtggattggctgacagcaaaaatgcgtgagaataatttcact
gtttcatctatgcatggagacatgcctcagaaagaaagagatgcaatcatgcaagaattc
cgctcaggtcaaactcgggttctgatcacaacagatgtttgggctaggggaattgatgtt
caacaggtttccctggtgattaattatgatcttcccaacaaccgagagctttacattcat
cgaatcggtcggtctggtcgttttggaagaaagggtgttgctataaactttgtgaaaagt
gatgacatcaaaatcttaagagacatagagcaatattacagtactcagatcgatgaaatg
ccaatgaacgtggctgatctaatttaa
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