Primulina huaijiensis: 140984738
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Entry
140984738 CDS
T11038
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
phua Primulina huaijiensis
Pathway
phua03420
Nucleotide excision repair
phua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140984738
09124 Replication and repair
03420 Nucleotide excision repair
140984738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phua04121
]
140984738
03400 DNA repair and recombination proteins [BR:
phua03400
]
140984738
Ubiquitin system [BR:
phua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
140984738
DNA repair and recombination proteins [BR:
phua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
140984738
TCR (transcription coupled repair) factors
Cul4-CSA complex
140984738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta_propel
Motif
Other DBs
NCBI-GeneID:
140984738
NCBI-ProteinID:
XP_073308431
LinkDB
All DBs
Position
9:23378158..23387876
Genome browser
AA seq
1089 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTAPHELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFHPHGETQDLLFIATERYKFCVLQWEPEAAEVITRAMGDVSDRIGRPTDNGQI
GVIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL
YQDNKDARHVKTYEVTLKDKDFIEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SASAFKAIPITPSITRSYGRVDTDGSRYLLGDHNGLLHLLVITHEKEKVTGLKIELLGET
SVASSISYLDNAVVFVGSSYGDSQLIKLNLHPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPFDTFLVVS
FISETRILAMNIEDELEETEIEGFYSNSQTLFCHDAIYDQIVQATSISVRLVSSTSRELR
HEWFAPAGYSINVATANTTQVLLALGGGHLIYLEIGDGVLTEIKHSQLEYDISCLDINPI
GDDPNYSHLAVVGMWTDISVRIFSLPDLNLVMKEPLGGEIIPRSVLLCTFEGMSYLLCAL
GDGHLLNFVLNTSTGELTDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSLMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLREHARRICH
QEQTRTFAICSLRHNQSSVEDFEVHFIRLLDDQTFDFISTYQLDQFECGCSILSCSFSDD
SNVYYCVGTAYVMPEENEPTKGRILVFAVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGSRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEG
AIEERARDYNANWMSAVEIIDDEIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPHDQYVFLEKLQMHLRKV
IKGVGGFGHEQWRSFYNEKKTVDSKNFLDGDLIESFLDLGRNRMEEISKAMGIPVEELMK
SVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtttggaattacgtggtgacggctcacaaaccgacgaacgttactcattcatgc
gttggcaattttactgctcctcatgaactcaatctcattgttgcgaaatgcactcgaata
gagatccatttacttactcctcaaggtctacagcctatgttggacgttccaatatatgga
agaattgcgacccttgagcttttccaccctcacggagagactcaagatctccttttcatc
gctacagaaagatataaattctgcgttttacaatgggagcccgaggctgcagaggttatt
acaagagcaatgggagatgtttcagatcgaataggtcgtcctactgataatgggcagatt
ggcgtaattgatccagattgcagattgattggacttcatctctatgacggcttgttcaaa
gtcattccatttgataacaaaggccagctcaaagaagcattcaatattaggcttgaggaa
cttcaggttttggatatcaaatttttgtatggatgcgccaagccaaccattgttgtactt
taccaggataacaaggatgcccgtcatgtgaaaacatatgaggtgactttgaaggacaaa
gattttattgaggggccatggtctcagaataatcttgataacggagcagatttgttaatt
ccagtgccacctcctctctgtggtgttctaattattggtgaagaaacaattgtgtattgc
agtgcctcagctttcaaagcaatcccaattacaccttcgatcacaagatcttatgggaga
gttgacaccgatggttcccgctacttactaggggatcacaatggacttctgcacttactt
gtcataacccatgaaaaggaaaaagtaacaggactcaaaattgagctcctgggtgagaca
tctgttgcatcatcaatttcctatcttgataatgcagttgtttttgttggctcaagttat
ggagattcacagctcataaagcttaatcttcacccggatgcaaaaggttcttatgttgaa
gttctcgaaaggtatgtcaatttggggcctattgtcgacttttgcgtggttgacttagag
aggcaaggtcaaggtcaggttgtaacctgctcaggagcttacaaagatggttctcttcgg
atcgtacgtaatggaattggaataaatgagcaggcatctgtagagcttcaaggaatcaaa
gggatgtggtcattacgttcagctactgatgatccatttgatacttttttggtggttagc
ttcatcagtgagacacgtatattggcaatgaacattgaggatgaattggaggaaactgag
atagaaggcttttattcaaattcccagactttattttgtcatgatgctatatatgaccag
attgtgcaggctacttcaatctcagtcagattggtcagttctacctctagagaactccga
catgaatggtttgctccagcggggtactcaatcaatgttgccacggccaataccactcag
gttttactggctcttggtggtggccatttgatctacttggaaattggtgatggagtgttg
acagaaataaaacatagtcagttagagtatgacatctcatgcctggatataaatccaatt
ggtgatgatccaaattatagtcacctagcagtagtgggtatgtggacagatataagtgtc
aggatattttcacttcccgatttgaacctggttatgaaagaaccattgggaggggagata
attcctcgttctgtactattatgtacttttgaagggatgtcttacttgttatgtgctctt
ggggatggacatctcttgaattttgtgttaaacactagtactggggagctgactgacagg
aaaaaagtgtctcttgggacgcaacccattacgcttcggactttctcatcaaagaatgcc
acacatgtttttgctgcttctgatagaccgactgtcatttacagcagtaacaagaaattg
ctttacagtaatgtaaatctaaaagaagtcagtctaatgtgccccttcaactctgctgct
ttccccgacagccttgcaattgctaaagaaggggaactcacaattggcaccattgacgac
attcaaaagcttcacatacgctctattccacttagggagcatgcacgacgaatatgccat
caggaacagactcgtacctttgcaatatgcagtttaaggcataaccagtcaagtgtagaa
gactttgaagttcacttcatccgtttgttggatgaccagacttttgatttcatttcaacg
tatcaactcgatcagtttgaatgtggttgctccattcttagctgctcattttctgatgac
agtaatgtatattactgtgtcgggaccgcatatgtcatgccagaagaaaatgaacctacg
aaaggccgcatccttgtttttgctgtagaagatggaaaacttcagctaattgctgaaaaa
gaaactaaaggggctgtttactctcttaatgccttcaatgggaagcttctagctgccatt
aatcagaagattcagttgtacaagtggatgcttcgtgatgatggttctcgtgagttgcaa
tctgaatgtggacatcatggacacatacttgctctctatgtacaaaccagaggagatttt
attgttgtaggtgacctgatgaaatcaatttctctgctgctttacaagcatgaggagggt
gctattgaggagcgagcccgtgactacaatgcaaactggatgtcagcagtcgaaattata
gatgatgaaatatacctcggcgctgaaaacaattttaatctcttcactgtccgcaaaaac
agtgaaggagccaccgatgaggagcggggacgccttgaggttgttggtgaataccaccta
ggtgaatttgtaaatcggtttcgtcatggttctctcgtcatgcgattgccagattccgaa
attggccagattccgactgtcatttttggaactgtcaatggagtcattggggtcatcgcg
tccctccctcatgatcaatatgtcttcctggagaagttgcagatgcacctgaggaaagtg
atcaaaggtgtgggaggatttggtcatgagcaatggaggtcattctacaacgagaagaag
actgtcgattctaaaaactttttggacggagatctaattgagtcgttccttgatcttggt
cggaatcggatggaggagatttcaaaagcaatgggtattccagtggaggaactaatgaag
agcgtggaagaattgactaggttacactaa
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