Primulina huaijiensis: 140985957
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Entry
140985957 CDS
T11038
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phua Primulina huaijiensis
Pathway
phua00040
Pentose and glucuronate interconversions
phua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140985957
Enzymes [BR:
phua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140985957
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
140985957
NCBI-ProteinID:
XP_073309995
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Position
1:23240438..23244026
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AA seq
480 aa
AA seq
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MEVLTSSRCIVLVFLVGAFSYQVSALLNLTLPGQHPDPESVAQDVHRRVNASMSRRQMLS
YTTSDQSSTCFTGNPMDDCWRCDPNWQLNRQRLADCAIGFGQYAFGGKGGRYYVVTDSSD
GDAVNPKPGTLRYAVIQTEPLWIVFPTNMLIHLSQELIFNSYKTLDGRGANVHITGGGCI
TLQYINNVIIHNIHIHHCYQSGETNVRSSPTHYGWRTLSDGDGISIFGSRDIWIDHCRLS
NCKDGLIDAVMGSTAITISNNIFSHHNEVMLLGHSDNYLPDSGMQVTIAFNHFGKRLIQR
MPRCRRGYIHVVNNDFTRWEMYAIGGSASPTINSQGNRYIASFDNNAKEVTKRLDTSDEE
WRDWNWRSEGDIMVNGAFFVASGQDVGVKYEKAYSVEPKSAADIDLLTLNAGVLRSRGNK
RAKWAGDSSGADFDSNSDGFDDYDDYSGSQKPYTNNSILTTFLTILTIFLFLHGTTTSIL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgctgacaagtagccgatgcattgtgcttgtatttcttgtgggtgcattttct
taccaggtttcagcattgctcaatctcactctccctgggcagcacccggaccctgaatct
gttgctcaagatgttcacagaagagtcaatgcatctatgtcaaggagacaaatgctatcc
tacaccaccagtgaccagtcatccacttgcttcactggcaatcccatggatgactgctgg
cgttgcgaccccaactggcaactcaatcgtcaaaggcttgcagattgcgccattgggttt
ggtcaatatgcttttggtggcaaaggggggcgttactatgtcgtgacagattcatcagac
ggcgatgccgtcaacccaaagccgggaacccttcgatatgcagtcattcaaacggaacct
ctgtggattgtttttcccaccaatatgctcattcatctctcccaagagctgattttcaac
tcctataagactctggacggccggggagcaaacgtacatataaccgggggaggatgcata
acattgcaatatataaacaatgtcatcattcataatatacacatacaccattgctaccaa
tcgggggagacaaatgttaggtcgagcccaacacattatgggtggcgtacactatcagac
ggtgatgggatctccatatttggatcaagggacatttggattgatcattgcaggttgtca
aattgtaaagatggcttgattgatgccgtcatgggatccactgcaatcaccatatctaac
aacatattttctcaccataatgaggtcatgttattaggccacagcgacaattatttgccc
gattctgggatgcaagtgaccatagcttttaaccattttggtaaaagattaatccagagg
atgccaaggtgtagaaggggatacatacatgtggtaaacaatgactttacaaggtgggaa
atgtatgcgattggaggtagtgcgagtcctaccatcaatagccaaggaaaccgctacatt
gcctcatttgataacaatgcaaaggaggttacgaaacggttggatacttcggatgaagaa
tggagggattggaattggaggagtgaaggagatataatggtgaatggagcattcttcgtg
gcgtcaggacaagatgtaggggtgaaatatgagaaggcttatagtgtggagcccaaatct
gctgcagatatcgacttgctcacgctcaacgctggtgtccttaggagcaggggtaacaaa
agggctaagtgggcaggagatagctctggagctgattttgattcaaattccgacggcttt
gacgactatgatgactactcggggagccagaagccttacactaataactctatcctgacc
acttttctaacgatcttgacaatctttttatttctacatggcactacgacttccattcta
tag
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