KEGG   Primulina huaijiensis: 140986014
Entry
140986014         CDS       T11038                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
phua  Primulina huaijiensis
Pathway
phua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140986014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phua03041]
    140986014
Spliceosome [BR:phua03041]
 Complex A
  U2 snRNP components
   U2 related factors
    140986014
 Complex B
    140986014
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C RRM_7 DUF8489 RRM_occluded RSRP RRM_PARP14_3
Other DBs
NCBI-GeneID: 140986014
NCBI-ProteinID: XP_073310044
LinkDB
Position
10:complement(1021182..1026828)
AA seq 567 aa
MMSIQEIAGNYYSPPPMDSPEAASLQQPAHRGSSSPNSMHTSLDHEKDRERESSRSRDKG
RGRGRDKGRDRDRERDRDRDRDKDRYRDRDHHHRDRHKDRSERRERERTRDRNDDDDYYK
SRDYERRRDYDKDRDDKPKHRSRSRSKPRSDHRSGSRSPSRSKSKRTSGFDMAPPVALLP
NAAAANAGQMLGTTPAIPGMFPNMLPLAPGQFGALPLMPVQAMTQQATRHARRVYVGGLP
PSANEQSVATYFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG
IMFEGAPVKVRRPSDYNPSLAATLGSSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLP
YYFTEAQVRELLESFGHLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGD
KTLTVRRANQGTAQPNPEQENVLLHAQQQIALQKLMLQPSVVAATKVLCLTEVVSPEELN
DDDDYEDILEDMKIECGKFGTLVNVIIPRPPPNNEPAPGVGKVFLEYEDVEGATKARQGL
HGRKFGGKEVVAVFYPENKFSEGVYDG
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgatgtcgattcaggaaattgctgggaactactactctccacctcctatggactcacca
gaagctgcaagcttgcagcaaccagctcacagaggatcatcgagcccaaattccatgcat
acctctctggaccatgaaaaagatagagagagggagtcctccagaagcagggataagggt
cgaggaagaggtcgtgataagggccgagacagggacagggagagagacagggacagggac
agggacaaggatagatatcgtgatcgagatcatcatcatcgagaccgtcacaaggatcgg
agtgagagaagggagagggagagaaccagagatcgaaatgatgatgacgactattataaa
agtcgagactatgagaggcggagagactatgacaaggatagggatgacaaacccaagcat
aggtcccggtctcgctccaagcctagatcagatcatagatcagggtcacgatctccttca
cgctctaaaagcaaaaggaccagtggttttgacatggcacctcctgttgcattgcttccg
aatgctgctgcggctaatgcaggtcagatgcttgggaccaccccggccattcctggaatg
tttcccaatatgttacctttggcaccgggacagtttggagcactccccctaatgcccgtt
caggcaatgactcagcaggctaccagacatgctagacgagtttatgttggaggacttcct
ccctctgccaatgaacagtctgtggcgacctactttagtcatgttatgtcagcaattgga
ggaaacaccgctggtccaggggatgctgttgtaaatgtttacatcaaccatgagaagaag
tttgcctttgtggaaatgagatctgttgaagaggctagtaatgctatggctttagatgga
ataatgtttgagggtgcaccagttaaagtgagaagaccgagtgattacaacccttcgttg
gctgccactttaggctctagtcaacctagccccaatctgaatcttgcagctgttgggttg
acaccaggatctgctgggggtctcgagggtcctgaccgtatatttgttggtggcttacca
tattattttacagaagcgcaggttagggagctgctggagtcttttggacatctccggggc
tttgatctggttaaagacagagaaacagggaattccaaaggctatgcattttgtgtttac
caggatttatcagttacagatattgcctgtgcagcactaaatgggataaaaatgggcgat
aaaacacttactgttaggcgtgctaaccagggtacagctcagcctaaccctgaacaagag
aatgtattattgcacgcccaacaacaaatagcattgcagaaactcatgttacaacccagt
gtagtggcggctacaaaggttctgtgccttacagaggtggttagtccagaggagctcaat
gatgatgatgactacgaagatatcttagaggacatgaaaatcgagtgtggaaaatttggt
actcttgtaaatgtgatcatccctcgcccacctcccaacaatgaaccagctccaggtgtt
ggaaaggtgttcttggagtatgaggacgttgaaggtgctacgaaagctcgacaaggatta
cacggaagaaaattcgggggaaaagaagttgtggctgttttctatccagagaacaagttt
tccgagggtgtgtatgatggctag

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