Primulina huaijiensis: 140987350
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Entry
140987350 CDS
T11038
Name
(RefSeq) phytochrome A-like
KO
K12120
phytochrome A
Organism
phua Primulina huaijiensis
Pathway
phua04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
140987350
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_8
Motif
Other DBs
NCBI-GeneID:
140987350
NCBI-ProteinID:
XP_073311914
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All DBs
Position
11:18673692..18678904
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AA seq
1122 aa
AA seq
DB search
MSSSKHGQSSTNSARPRDGARIIAQTSIDAKLQANFEESGSSFDYSSSVRVRNSGNEEQT
SKSDKVTTAYLHQIQKGKRIQPFGCLLALDEKTFQVIAFSENAPEMLTTGSHAVPSVGDH
PVLEMGIDIRTIFTGPSASALQKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLVI
DFEPVKPHDVPMTAAGALQSYKLAAKAITRLQSLPSGSLDRLCDTMAQEVFELTGYDRVM
IYKFHDDDHGEVITEVKKQGLEPYLGLHYPATDIPQAARFLFMKNKMRMICDCRANYVNV
IQDEKLSFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEEGPDSSLPQKRK
RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMVEKNILRTQTLLCDM
LLRDAPLGIVSQSPNVMDLVKCDGAVLLYKGKNHKLGSTPTNFQLQDIVSWLEEYHRDST
GLSTDSLYDAGFARALALGNAICGMAAVKLNGKDWLFWFREHTAAEIRWGGAKHESGDRD
DGSKLHPRSSFNAFLEVVKMRSLPWKDYEMDAIHSLQLIIRNSCKDSEAMDTDSKAFHTR
LTDLKIDRIQELEAVTSEMVRLIETASVPILAVNIDGQVTGWNRKIANLTRLPVDKAIGR
HLLELVEEGSADTVSKMLGLALEGREERNVQFEIKSFGSNSESYPVTLVVNACSSRDVRE
NVVGVCFIAHDITAQKDITDKFTRIEGDYRSIVQNPNPLIPPIFGTDEFGWCSEWNPAMV
KVSGWTRDDVINKMLMGEVFGTQNSCCRVKNQETYVNLGIVLNSAVSGQDIEKLPFGFFS
RSGKYVDCLLCVSKKLDREGAVIGVFCFLQLASQELQQALHVQRLSEQIALKRSRVLAYI
RREAKNPLSGIIFSRKLMERTELDEEQKNFLQTSVFCQSQLDKVLDDTDLDQMIGGYLDL
DMVEFKLHEVFIASISQVMLKSHEKGVTIVDNLTPNISNETLFGDSVRLQQILTSFLLTS
ITFTPSHGQLAVAATLSKDSIGESVQLGHLEFRITHSGEGVPQELLSQMFGDEADATEEG
ISLFISRKLLKLMNGDVQYLREAQRATFIVSVELAISNTSRF
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcaaaacatggccaatcttcaacaaattctgcacgaccaagggatggtgca
aggataattgcacagacatctatagatgcaaagctccaagcaaactttgaggaatctggc
agttcatttgactactcgagctctgtgcgtgttagaaattctggcaatgaagagcaaacg
tctaagtctgacaaagtgactaccgcttatcttcatcaaatacagaaaggtaagcgaatc
cagccgtttggatgtctattggccttggatgagaaaactttccaagtgattgcctttagt
gagaatgctcccgaaatgctaacaacgggcagccatgcagttccaagtgtcggtgatcac
ccggttcttgaaatggggattgatatcagaacaatttttacaggtcctagtgcttcggcc
ttgcagaaggcattaggatttggagaggtttctttgttaaacccagtcttagttcattgt
aaaacttcgggaaagcctttttatgccataatccatagagttacaggtagtttagttatc
gactttgagcctgtgaagcctcatgacgttcctatgactgctgctggagctttacaatcg
tataagcttgcagccaaagccattactcgcttgcagtccttaccgagtgggagcttggat
aggctatgcgataccatggcacaagaagtgtttgaactcactggttatgacagagtaatg
atatataagtttcatgatgatgatcatggagaagtgatcactgaagtaaaaaagcagggc
ctcgaaccatatctcggcttgcattatccggcaactgatatcccacaagctgcccgtttc
ttgttcatgaagaacaagatgagaatgatctgcgattgtcgagcaaattatgtaaatgtg
attcaagatgagaaactttcttttgatcttactttgtgcggctcgacccttagagcccct
catggttgccattcacaatacatggaaaacatgaactcaattgcatccctagtaatgtcg
gttgtagtaaacgagggagatgaagaaggcccagattcttctttgccgcaaaagagaaaa
aggctctggggattggtggtttgccacaatactactccaaggtttgttcccttccctctc
cgatacgcatgtgaatttctcgctcaggtctttgctatacatgttaacaaggaattagaa
ttggaaaatcaaatggtcgagaagaatattttgcggactcagacgctattgtgtgacatg
ctgttgcgagatgcgcccctaggtattgtgtcccaaagtcctaatgtaatggatcttgtg
aaatgtgatggggccgtgttactatacaagggtaaaaatcataaattaggatcgactcca
actaactttcagcttcaagatatagtttcatggctcgaagaataccacagggactcaaca
ggtttgagtacggatagcttgtatgatgctggttttgctagagctctagctcttgggaac
gctatctgtggaatggcagctgtaaagttaaatggcaaggattggcttttctggttcaga
gagcacactgctgccgaaattcggtggggtggagcgaagcacgaatctggtgacagagac
gatgggtcaaagttgcatcctaggtcgtcatttaatgcattcttggaagttgtgaagatg
cggagtttaccttggaaagactatgagatggatgcaatccactcgttgcagcttattata
agaaattcgtgtaaagattccgaggcaatggatacagactcaaaggcatttcatacaagg
ctcactgacctgaaaattgatagaatacaggagcttgaagcagtgacttctgagatggta
cgcctgattgaaactgcctccgttcctatcttggctgttaatatagatgggcaggtgact
ggatggaataggaaaattgccaatttaactcgtcttcctgtcgataaagcaattggtcgg
catttgctcgaacttgttgaagaaggttctgcagatacagtgagtaagatgttgggattg
gcacttgaaggaagagaagaacgtaacgtgcaattcgagatcaagtcatttggatcaaat
agtgaatcctacccagtcaccttagttgtcaatgcttgctcgagcagggatgtccgggag
aatgtcgttggagtgtgttttattgctcacgatataaccgcacagaaggatataacagac
aagtttacaagaatagaaggagattatagatccatcgtgcaaaacccgaatccattgatc
ccgccaatatttggtactgacgaatttgggtggtgttcggaatggaatcctgctatggta
aaagtatcgggatggactagagacgacgtgatcaataaaatgctcatgggagaggtcttc
gggacgcaaaactcttgttgccgtgtcaagaatcaagaaacctatgtaaatctgggtatt
gtactcaacagtgctgtgagtggtcaagacattgaaaaattaccgtttggttttttctct
aggagtggaaagtacgtggattgccttttatgtgtgagcaaaaagttggatcgagagggt
gccgttatcggagttttttgcttcctgcagcttgctagtcaagagctccaacaagcgctt
catgttcaacggttatcagagcaaattgcattgaagagatcgagagtcttggcttatatt
cgaagagaggcgaaaaatcctctttctgggattatattttcacggaagttgatggaaaga
accgaactagatgaggagcagaaaaattttttgcagacaagtgttttctgtcaaagtcag
cttgacaaagttcttgacgacacggatcttgatcagatgattggagggtacttggatctt
gatatggtggagtttaagctacacgaggtctttatcgcgtccataagtcaagttatgtta
aagagccacgaaaagggcgtcacaattgtcgataacttgactccaaatatctcgaatgaa
acactattcggggacagtgtaaggcttcaacaaatcttgacttctttcttgctgacatct
attactttcacaccgagccatggccagcttgccgttgccgccactttgtcaaaagattct
atcggagaatctgtacagctcggccatttggaattcaggataacgcatagtggcgaagga
gtgcctcaagaattactgagccaaatgttcggtgacgaagcagatgcaactgaagagggg
attagcctttttatcagtagaaaactgttgaagcttatgaatggggatgttcagtatctt
agggaggcgcagcgagccactttcatcgtctctgttgagcttgcaatctcgaatacatct
cgcttctga
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