Primulina huaijiensis: 140987509
Help
Entry
140987509 CDS
T11038
Name
(RefSeq) vacuolar sorting protein 18 isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
phua Primulina huaijiensis
Pathway
phua04142
Lysosome biogenesis
phua04145
Phagocytosis
phua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
140987509
04142 Lysosome biogenesis
140987509
04148 Efferocytosis
140987509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phua04131
]
140987509
Membrane trafficking [BR:
phua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140987509
Hops complex
140987509
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
Clathrin
VPS18_RING_C
zf-rbx1
zf_RING_Vps8
zf-RING_UBOX
zf-RING_11
zf_RING_Vps8_fungal
RPN1_RPN2_N
zf-RING_Vps41
Nup54_57_C
zf-ANAPC11
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
140987509
NCBI-ProteinID:
XP_073312131
LinkDB
All DBs
Position
11:complement(23598810..23611610)
Genome browser
AA seq
987 aa
AA seq
DB search
MEHRRHVFSVDLLERYAAKGKGLITCITSGNDVIVLGTSKGWIIRHDFGVGDSFDIDLSV
GRSGEQSIHRVFVDPGGSHCIATVVGGGTSDTFYTHAKWAKPRILSKLKGLVVNDVAWNK
QLITEASTREILLGTDDGQLYEIAVDEKDKREKYIKFLFKLNELPEAFTGLQMETAHIHN
GTRYYVMAVTPTRLYSFTGIGSLDSVFASYANRAVHFMELPGEIPNRQLHFFIKHRRAIY
FAWLSGAGVYHGGLNFGAQHSSPNGDENFVENKALFDYSKLGEGVLVKPSSLSVSEFHFL
LLLGNKVKVVNRISERIVEELYFDQTPDAVSRGILGLCSDASAGLFYAYDQNSIFQVSVN
DEGRDMWKVYLDLKEYAAALANCRDALQRDQVYLMQAETAFTSKDFLRAASFYAKINFIL
SFEEITLKFISIGEQDALRTFLLRKLDNFAKDDRCQITMISTWATELYLDKINRLLLEDD
AEFDSGSSEYQSIITEFRAFLSDCKDVLDEATTMKLLESYGRVDELVFFASLKEQYEIVV
HHYIKLGEAKKALRVLQKPNVAIDLQYKFAPDLIMLDAYETVESWMITKDLNPRKLIPAM
MRYSSEPHAKNETHEVIKYLEYCVHRLQNEDPGVHNLLLSLYAKQDDESTLLRFLQCKFG
KENPNSPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDVELAMAEADK
VEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALI
DDFKEAICTSLEDYNEQIEKLKQEMNDATHGADNIRNDIGALAQRYAVIKRNEECGVCRK
KILDASGDYRMARAYTSVGSMAPFYVFPCGHSFHSHCLIAHVTKCTTETQAEYILDLQKQ
LTLLGDEPRKEMNGSLKEEDLIMSMTHGEKIRSRLDDAIASECPYCGDLMIHEISLPFIL
PEETDEVESWEIKPHNLGTQKSISLTV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcggcggcatgttttctctgtagatttgctggagaggtacgcggcgaaggga
aaaggactgatcacgtgtattacatccggtaatgacgtcatcgtgctggggaccagtaaa
ggatggatcattcgtcacgattttggcgtcggcgattcttttgatatcgatctatctgtg
ggtagatctggggagcagtcaatccacagggtttttgttgaccctggaggtagccactgt
attgctactgtagtcggcggtggaacttctgatacattttatacccatgcaaagtgggcc
aagcctcgaattttgagcaaactgaaaggtcttgttgtgaacgatgttgcctggaataag
cagcttataactgaagcttccaccagggaaattcttctcggcacagacgatggccaactt
tatgaaattgcagtagatgagaaggataagagagaaaaatacatcaagtttttgtttaag
ctgaacgaacttccagaagctttcacgggtttgcagatggaaacagcacatatacacaac
ggaactagatattacgtcatggccgttacacccacccggctttattctttcactggaatt
ggttcgttggattctgtttttgccagttatgccaaccgtgcagttcacttcatggaactg
ccaggtgaaattccaaacaggcaactacactttttcataaaacacagaagagccatatat
tttgcatggctatctggagcaggagtctatcacggtggtcttaattttggagcacagcac
agttcacctaatggggatgagaattttgtggagaacaaggctctctttgactattcaaaa
ttaggtgaaggtgtattggtcaaacctagttcactttcagtatcggagttccatttcctt
ctcctgctagggaacaaagttaaggttgttaatagaattagtgaacggattgtcgaggaa
ctttattttgatcaaacacctgatgcagtttcaaggggtattctaggtttatgtagtgat
gcatctgctgggcttttctatgcgtacgaccagaattctatctttcaggtatctgtgaat
gatgaaggccgagacatgtggaaagtttatttagatttgaaggaatatgctgcagctttg
gcaaattgtcgtgatgccctccaaagagatcaagtatatctgatgcaggctgaaactgct
tttacttctaaggattttctcagagctgcttcattttatgcgaagattaactttattctg
tcatttgaagaaatcactttgaagtttattagcataggggaacaggatgctttaaggacc
ttcctgttgcggaagcttgataattttgcaaaggatgacagatgccaaattacaatgatt
tccacgtgggcaactgaattatatttggataaaattaatcgactactgttggaagatgat
gctgagtttgatagtggtagctcagagtaccaatccattatcacagaatttcgtgccttt
ttgagcgactgcaaggatgtgttggatgaggctaccaccatgaaacttcttgagagctat
ggtagagtagatgaattggtattcttcgctagtcttaaagagcaatacgagattgtggtt
catcattatattaagcttggagaagcaaagaaagcactgcgagttcttcagaaacccaat
gttgccatagacctacagtacaagtttgctccagatctcatcatgttagatgcatatgaa
actgttgaatcatggatgataacaaaggacctgaacccaagaaaactcattcctgcaatg
atgcgctattcaagcgaaccacacgcaaagaatgaaactcatgaagtgatcaaatatttg
gagtattgtgttcatcgcttgcagaacgaggacccgggcgttcataatttgttgctctcg
ttgtatgctaagcaggatgatgagagcactcttctgcggttcctgcaatgcaagtttgga
aaagagaatcccaattcccctgagttcttctatgatccaaaatatgccttgcgtctttgc
ctcaaggaaaaacggatgcgtgcttgtgtccatatatacagtatgatgtctatgcacgaa
gaagcagttgctcttgctttacaggttgatgtcgagcttgccatggctgaagccgataaa
gttgaagatgatgaagacttgaggaagaaactttggcttatggttgctaagcatgtcatt
gaacaagagaaggggacgaagcgggagaatataagaaaggcaatagcatttctcaaggaa
actgatggacttctaaagatcgaagatatcttaccctttttcccagattttgcattgatt
gatgatttcaaggaggcgatctgtacatcactcgaagattacaatgagcaaatcgaaaaa
ctcaaacaagagatgaatgatgctactcatggtgctgacaacataaggaatgatattggt
gcccttgcacaaagatatgctgtaattaagcgaaatgaagaatgtggggtttgccgaaag
aaaatattagatgcatctggtgactatcggatggccagggcttatacttcagttggatcg
atggcacctttttatgtctttccttgtggacattcctttcattcgcattgtttgattgcc
catgtcactaaatgcactactgaaacccaagctgaatacatactagatttgcaaaagcag
ttgactttactgggtgatgaacctaggaaggaaatgaacggcagcttgaaagaagaggat
ctgataatgagcatgactcatggagaaaagattcgatcacggttggatgatgcgattgcc
agtgaatgcccgtattgtggtgacttgatgatccatgaaatatctttacctttcatactc
ccggaggagacagatgaagtagaatcatgggaaataaagccacataatcttggaactcag
aagagcatatcattaactgtgtga
DBGET
integrated database retrieval system
