Primulina huaijiensis: 140987762
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Entry
140987762 CDS
T11038
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140987762
03012 Translation factors [BR:
phua03012
]
140987762
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140987762
mRNA cycle factors
Stress granule specific factors
140987762
Translation factors [BR:
phua03012
]
Eukaryotic type
Initiation factors
eIF-4
140987762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
CNOT1_CAF1_bind
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
140987762
NCBI-ProteinID:
XP_073312515
LinkDB
All DBs
Position
11:20489182..20500477
Genome browser
AA seq
1807 aa
AA seq
DB search
MTHNPSKADRSESTQHKKPDRSASFNQQRQFSGSVSSKGGGGASSAPLNNSNRGVKKYNG
NAPGVQSRPRSPNVNSGFSNSYTSHAVQNDAHKQQPANRVSDAPVACSASNVDSMDATPQ
KINQVVPRPPASDIYVASPSSNPFTAGSEPKAPTIPAKPPGDASRSFPLQFGSISPGLMN
GAQIPARTSSAPPNLDEQKKDQVRHQSLRTAAPAKPLSSIPKQLSTKKDAVTFDQSNAGE
SQPVSLSRRDTQVSAAPPMAQTQKPSVLSVPGVPMQLPFHQSQVTVQFGGPNPQIQSQSM
SGSLQLPMPMPMPMPLPLPMGNPPVQQPVFVSGLPPHPMQSQGMMHQGQALNFPSQMGPQ
LPSQLGNLGMNMVPQFPQQQAVLYGGSRKTVKITHPETHEELRLDGSPGLRSHSNVQPQS
QHIPSFPPNHLMSFYNATSFYVPAASSVPPNSTQLPPTSQPLNFYNQVTIKPAIDPHGEK
EVLKPTSSISVGKAQSLKPSKLHMDDLAQPQKGIGPSSSGVLPESKPGPGTSLTSELPSS
SVDVEVNVLATSAVTFASGDGFASKSTTLTEEASNGVVAPDPIENKHKKSDNIGQQDQVS
WQSTSHLNYPLQLPETEAVEAKSASSRTNIVSEPVQELFSTTVGASSEASKVSSDGAAER
NTSDTLKSLDNSYIKSGLLKSDSVGGKEDAEDIMLNTNQNSLDTLTKPLSLELSEICEVE
ESSLQEVASTADGLMERAKQKTKEPSGCGYDYTKVDDHVFESTHTAYCEGVENSASVNGL
SAQDINIIISDTPLSIPENISTMPAAVDKESSPILVASLEGPLTYENEDNNLNSCGIISP
SPVITKENIFSDTSVQKSVVLRGKKKKKELYKKAEAAGTSSDMYMAYKGPEEKKENATLA
EDLKNISSSSIKQTSVDVPNQNASLTEKPAQSRVEPDDWENAAEIPTPQPESSNNEIQSH
DKDDDGLMIKQYSRDFLFKFAEQCTDLPEAFEITSDVADAFMVSSSHFSRNPHPSPGRNI
DRPTGGSRLDRRGSDLGNEDKLSKFPVHLVSGRGDTRVDVGYVGNVTGFRNSHGGNYGVP
RNPRGQTSVHYSLGILSGPIQSPDLHGGLQRNNSDSDRWQRGAGFQKGLIPYPQTPLQVM
HKAEKKYEIGKITDEEEAKQRQLKSILNKLTPQNFEKLFEQVKEVNIDNFVTLSGVISQI
FDKALMEPTFCEMYANFCFHLAAGLPNLRVDNETITFKTLLLNKCQEEFERGEREEEEAN
KAEEEGENKRTAEEREEKRLQARRRMLGNIRLIGELYKKKMLTARIMHECINKLLGQYQT
PDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFDIMANLSNNMELSSRVRFMLKDVIDLR
KNRWQQRRKVEGPKKIDEVHRDAAQERQAQASRLGRAPSMGSSVRRGPPVDFAPRTPIML
PSPNSQLSGFRAVPPQTRGYDSQDVRTEERHSLESRIMSVPLSQRPLGDEPITLGPQGGL
ARGMAFRGQPSAPSIPLPEMPNPGDSRRTGPGLNGFSSMPDRYGQRGDFTPRYMPDIFAA
PPNYDQSLPPDEKVAHGNREIRNADHGFDRSLPAPLPTCGAPPLSTQDVSSEIVWPEERL
RDKSMATIKEFYSARDENEVALCIKDLNTPSFYPSMISIWVTDSFEKKDVERDLLTKLLI
SLVKRQDGMINKDQLIKGFEYVLSVLEDTVNDAPRAAEFLSRILAQVILENTVGLSAIGR
LIYEGGEEQGRLVEIGLAAEVVGGILEIIKSVKGDSVLSEMLSSSNLQLENFRPPGSKKS
WRLDKFL
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgacccataatccatcaaaggctgacaggagtgagtctacgcagcataagaaaccagat
cgatctgcaagcttcaatcagcagcgccaattctccgggagtgtctccagtaagggtggt
ggcggcgcctcctccgcccccttaaataattctaatcgtggtgtcaagaaatataatggc
aatgcaccaggagtacagtcaaggcctagaagcccgaatgtgaattcaggtttcagtaat
tcgtatacatcgcatgcagtgcagaatgacgctcacaagcagcagccagccaacagagtg
tctgatgcgccagttgcttgttcagcttccaatgttgattcgatggatgctacacctcaa
aaaatcaaccaagttgttccaaggcctccagcttctgatatttatgttgcatctccgtcg
tccaatccttttactgctggttctgaacccaaggcccctactatacctgctaaaccacca
ggagatgcatcaaggtcatttcccttgcagtttggatccataagtcctggtttaatgaat
ggtgcgcagatacctgctcgaacaagctctgcaccaccaaatttggatgaacaaaaaaag
gatcaggtccggcatcaatctttaaggactgctgctcctgcaaaaccactttcatccatt
cccaaacagctttcgacaaagaaggatgctgtgacttttgaccaatctaatgctggtgaa
tctcagccagtgtcattgtctaggagggatactcaagtttccgctgcaccacctatggct
caaactcagaagccttctgtactctctgtccctggtgtgcccatgcagctaccgtttcac
cagtcacaagtcactgttcagtttggcggtcccaatccacaaattcaatctcagtctatg
tcaggatcattgcaattgccaatgccgatgccgatgccgatgccattgcccttgccgatg
ggtaacccaccagtgcagcaacccgtgtttgtttcaggtcttccaccgcatccaatgcag
tctcaaggaatgatgcatcagggacaggccttgaactttccatcacaaatgggtcctcag
ttaccttctcagttgggaaacttaggaatgaatatggtcccgcagtttcctcagcagcag
gctgtcttatatggcggttctcgtaaaaccgtgaagatcactcatccagaaactcatgaa
gagttaaggcttgatggctcacctggtctaaggtcacattctaatgtgcaacctcaatca
cagcatattccatcttttcctcccaatcacctgatgagtttttacaatgccacttctttt
tatgttcctgctgctagctctgttcctcctaatagtactcagcttccgcccacttctcag
ccactgaatttttataaccaggtgacgataaaaccagccattgaccctcatggggagaaa
gaggtattaaaacctacaagttctatatctgttggaaaggcgcaatctttgaagccttca
aagttacacatggatgatttggcccagccacaaaagggaattgggccttcatcttctggt
gttttgccagagtcaaaacctggaccaggaacatcattgacatctgagttgccatcaagt
tctgttgatgtagaggttaatgtacttgccacttcagctgttacatttgcatctggtgat
ggttttgcatcaaagtcaaccacgttgactgaggaagcaagtaatggagtggttgcgcct
gatcccatcgaaaacaagcataaaaaatcagacaacattggccagcaggatcaggtcagc
tggcaatcaacctctcatttaaattatcctcttcaacttccagaaactgaagctgtagaa
gctaaatctgcttcatcgagaactaatattgtgtccgaacctgtgcaagaattgttttca
acaactgtaggtgcgtcttctgaggcttccaaagtttcaagtgatggtgctgcagaaagg
aacaccagcgacacacttaagagtttagacaactcgtacataaaaagcggactgttaaaa
tctgactcagttggtggaaaggaagatgcagaagacataatgttgaacaccaatcagaat
agtttggatacattaacgaaacctctttctttagaattatcagagatttgtgaagtagag
gagagctcattgcaggaggttgcatctactgcagatggtttaatggaacgggcaaagcaa
aagacaaaagaaccttcaggttgtggctatgattataccaaagtggatgatcatgtattt
gagtctactcacacagcatattgtgaaggtgttgagaattctgcatcagtgaacggttta
tctgctcaagatataaatattataatttcagacacgccattaagcatacctgagaacatt
agcacaatgcctgctgcggtagataaggagtcttcccccattttagttgcatctcttgaa
ggtcctttgacatatgaaaatgaagataataacctcaatagttgtggcataatttctcct
tctccagttatcaccaaagagaacatcttttcagatacaagtgtgcaaaaaagtgttgta
ctcagaggaaagaagaaaaaaaaagagttgtataaaaaagcagaagctgccggtacgagt
tcggatatgtatatggcatacaagggtcccgaggaaaagaaagaaaatgctacgcttgca
gaggatttaaaaaacatttcaagctctagcatcaaacagacatctgttgatgtacctaac
caaaatgcctcgttaactgagaaaccagctcaaagtagagttgagccagatgattgggaa
aatgccgctgaaatccctactccacagccagaatcttcaaataatgaaattcagagtcat
gataaagatgacgatggcttgatgataaaacagtattctcgagatttcctcttcaaattt
gcagagcaatgtactgatctcccagaagcatttgaaattacctctgatgttgctgacgca
tttatggtatctagttcccatttttcacgcaatccacatcctagtcctggacgaaacatt
gatagaccaactggaggctcgaggttggatcgacgtggaagtgacttgggaaacgaggac
aaattgagtaaatttcctgtacacctcgtgtcaggtagaggagacacgcgagtagacgtt
ggttatgtgggtaatgttaccgggtttcgaaatagtcatggaggcaattatggtgttcca
aggaatccacggggtcagacatccgtccactattctctgggcattctctctgggccaatc
cagtcccctgatctccatggaggcctgcaaagaaataactccgattctgacaggtggcaa
cgtggagctggtttccagaagggtttgattccttatcctcagacccccctacaagtcatg
cacaaagctgagaaaaagtatgagattggtaagatcactgacgaggaagaagcaaaacag
aggcagttgaagtctatcttgaacaagcttaccccacaaaacttcgagaagctgttcgag
caagtgaaagaagtgaacattgacaattttgttactttgtcaggggtgatctcccagatt
tttgataaagctctgatggagcccaccttttgcgaaatgtatgccaacttctgttttcac
cttgcagcaggtttacctaatttgagagtggacaatgaaacaatcactttcaaaacgcta
ctcctgaacaaatgtcaagaagaatttgagaggggagaaagagaggaagaggaagcaaat
aaagcggaggaagaaggcgaaaataaacgtacagcagaagagagagaagagaagagactc
caagcgaggagacgcatgttgggtaatattagactaattggagagctgtacaagaaaaaa
atgttgactgcgagaataatgcacgagtgcattaataagttgttgggtcagtatcaaact
cccgatgaagaaaatattgaagcgttgtgcaaattgatgagcacgatcggtgagatgata
gatcatcctaaagcaaaggaacacatggatgcctattttgacattatggctaatctgtcg
aataatatggagctgtcatctagggtaaggttcatgcttaaagatgttattgatcttaga
aagaataggtggcagcagaggaggaaagttgaaggtccaaaaaaaattgacgaggtacac
agagatgctgctcaagagaggcaagcacaagctagtaggttaggtcgtgctccgagtatg
ggtagctctgtcagacggggtccacctgtcgattttgctcctcgaactcctattatgttg
ccttctccaaattcccagttgagcggctttcgtgctgtcccacctcagacacgtggttat
gattctcaggatgttaggaccgaagagagacattcccttgagagtaggataatgtctgtt
cctctgtctcaaagacctcttggggatgagcctataactcttgggcctcaaggtggtctc
gcaaggggaatggctttcagggggcagccatcagcacctagtattcctctgcctgagatg
ccgaatcctggagattcaaggaggacgggacctggtctgaatggattcagttcaatgcca
gatcgttatggccaaagaggggatttcacaccaagatatatgccagacatttttgctgct
ccgcccaattatgaccagtcgcttccaccagatgaaaaagttgcccatggcaatagagaa
attagaaatgcagatcacgggtttgatagatctcttcctgctcctctacctacttgtggt
gcacccccattaagtacgcaagatgtgtcttcagaaatagtgtggccagaagagcgcctg
cgggacaagtccatggctacaattaaggagttctacagtgcgagagacgaaaatgaagtt
gctttatgcatcaaggatttgaacacccccagcttttatccatctatgatatctatttgg
gtaactgattcttttgagaaaaaagacgtggaaagagatctcttgacgaagctgcttatt
agcctcgtaaaacgtcaagatggcatgataaacaaggatcagctcatcaaagggtttgaa
tatgttctctccgtcctggaggatactgtaaatgatgcccctagagcagcagagtttcta
agtcgtattcttgcacaagttatattggaaaacactgttggtctttctgcaattgggcgt
ttgatatatgaaggtggagaagagcaagggcgtcttgtagaaattgggcttgcagccgaa
gttgttggaggtatcttggagattatcaaatcagtaaaaggtgattcagtattgagcgag
atgctttcgagctctaatctgcagcttgaaaacttcagacctccgggctcaaaaaaatct
tggagattagataagttcctttag
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