Primulina huaijiensis: 140988991
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Entry
140988991 CDS
T11038
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phua Primulina huaijiensis
Pathway
phua00040
Pentose and glucuronate interconversions
phua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140988991
Enzymes [BR:
phua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140988991
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
140988991
NCBI-ProteinID:
XP_073314236
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Position
11:complement(20923935..20927894)
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AA seq
432 aa
AA seq
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MAMGASEKWLRPLFSLLLLVLFVGSMARVHKNESRSFRWEGIDEGALNEHAVDDPDEVAK
MVEMATRNSTERRNLGYFSCGTGNPIDDCWRCDPNWQRNRKRLADCGIGFGRNAAGGRDG
RFYVVTDSGDDDPVNPRPGTLRYAVIQEEPLWIVFKRDMIITLKQELIMNSFKTIDGRGV
NVHIANGGCITVQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTTADGDAISIFGSS
HIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAY
NHFGEGLIQRMPRCRLGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPANPFAKEV
TKRVDTAESKWKGWNWRSAGDLMLNGAYFTPSGAGASASYARASSLGAKSSSMVGSITSG
AGVLGCRPGRQC
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggagcttcggaaaaatggctgcggcctctgttttctttgctgctgctcgtg
cttttcgtcggatcaatggcaagagttcacaaaaacgaatcccgaagtttcaggtgggaa
ggaattgacgagggtgctttgaatgagcatgcggtggatgacccggatgaggtcgcaaaa
atggttgaaatggccactcggaacagcacagagaggcgaaatcttggatatttctcctgt
ggaactggtaaccctattgatgactgttggcgttgtgatcctaactggcagagaaaccgc
aagagacttgctgactgtggtattggttttgggcgtaatgccgctggcggacgtgatggc
cgattctatgttgtcactgattctggtgatgatgaccctgtcaaccccaggcccggcact
ttacgttatgctgttatccaggaggaacctctttggatagtgttcaagcgcgacatgatt
attactttgaagcaagagctcataatgaacagctttaagaccatagatggtcgcggagtc
aatgttcacattgccaatggaggctgcatcacagtccaattcattaccaatgtgattatt
catgggctgcacattcacgactgtaagccgacaggaaacgcaatggtgcggagctcacca
tcacattatggttggaggacgacggctgatggtgatgccatttctatctttggctcgagc
catatttgggtcgatcataactcgctctctaactgtgctgacggccttgtagatgctgtc
atgggctctactgccatcaccatttcaaacaattattttacccatcataatgaggttatg
ctgttgggtcatagcgattcttatgtcagagacaagcaaatgcaagtgaccatcgcatat
aatcatttcggggaaggcctcattcaaagaatgccaaggtgcagacttggatactttcac
gttgtgaacaatgactacactcattgggagatgtatgccatcggtggaagtgcaaacccc
acaatcaacagccaaggcaacagatatcttgcaccagccaatccttttgcaaaagaggtg
acaaagagggtagatacagctgagagtaaatggaagggttggaactggagatcagcaggt
gacctgatgttgaatggagcttatttcactccatctggagccggagcttcggccagctat
gctagagcttcaagcttaggtgccaagtcttcctccatggttggatctatcacttctggt
gctggagttcttggttgccggcccggccgccagtgctaa
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