Primulina huaijiensis: 140989449
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Entry
140989449 CDS
T11038
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
phua Primulina huaijiensis
Pathway
phua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140989449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phua04121
]
140989449
Ubiquitin system [BR:
phua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140989449
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Paralog
GFIT
Motif
Pfam:
Transp_inhibit
LRR_SKP2
F-box_5
LRR_At5g56370
LRR_FBXL15
F-box-like
F-box
LRR_NXF1-5
LRR_4
F-box_COS111
Preseq_ALAS
OST-HTH
Motif
Other DBs
NCBI-GeneID:
140989449
NCBI-ProteinID:
XP_073314751
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All DBs
Position
1:complement(25888224..25891586)
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AA seq
578 aa
AA seq
DB search
MAYSFPEEVLELVFSFLNTDRDRNAVSLVCKSWYEIERWCRSRIFLGNCYAVSPEVVIRR
FPEVKALEMKGKPHFADFNLVPDGWGAYFYPWVAAMSVAYPLLEEIKLKRMVVTDECLEL
ISKSFKNFKVLVLSSCEGFSTEGLASIAASCRNLRELDLRESEVEDLSWLWLSQFPKNYT
SLVSLNMSCLHSEVNFSTLERLVERSPNLRTLRLNRAVPLEKLPNLLRRAPQLVELGTGI
YSAEIRSDVFCNMREAFSACKNIKGLSGFWDVAPAYLPAIYSTCSGITSLNLSYATVQSS
DLLKLLSHCRNLQRLWVLDYIEDSGLEALASSCKDLHELRVFPSDPFGGEPNVSLTEQGL
VYVSEGCPKLQSVLYFCRQMSNAALVSIARNCPKMIRFRLCIIEPRAPDYLTYEPLDTGF
GAIVGRCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHILSGCDSLR
KLEIRDCPFGDKALLANASKLETMRSLWMSSCLVSFGACKLLGQKMPKLNVEVIDERGPP
DSRPETCPVEKLYIYRTITGRRFDMPGFIWTMNEDSES
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactctttcccggaggaggtcctggagctcgtcttctcgttcctgaacaccgac
agagatcggaacgcggtttcgctggtgtgcaagtcttggtacgagatcgagcggtggtgc
cgcagccgtatcttcttagggaattgctacgccgtctcgccggaggtggtgatccggagg
tttccggaggtgaaagctctggagatgaaggggaagccgcattttgcggatttcaacctc
gtcccggacggttggggtgcgtatttctatccgtgggtggcggcgatgtccgtggcttac
ccgttactcgaggagatcaagctgaagcgtatggtggtgacggatgagtgtttggagctg
atctccaaatcgtttaagaatttcaaagtcttggtgctctcgtcgtgtgaggggttttcg
accgaaggtctcgcttcgattgcagctagctgcaggaatctcagagaacttgacttgagg
gaaagcgaagtagaggacctgagttggctttggctcagtcagtttccaaaaaactacacc
tcattggtgtctcttaacatgtcttgcttgcactctgaggtgaatttctcgaccttggag
cgtttggttgaacggtctcctaatctaaggacactacggctgaatcgtgctgtacccctt
gagaagcttcctaatctacttcgccgtgcacctcagttggttgaattgggcactggcatc
tattcagctgaaatacgctctgatgtcttttgtaacatgagagaagcattctctgcatgt
aagaatattaaaggcttgtctggtttttgggatgtggcaccagcttatcttccagctata
tattctacctgctcaggaataacatctctgaatttaagctatgcaacagttcaaagttct
gatcttcttaagcttcttagtcattgtcgaaatttacagcgtctatgggttctggattac
attgaagacagtggccttgaagcccttgcttcatcttgcaaggatttgcatgaacttcgg
gtgttcccttcagacccttttgggggagaacctaatgtttctttgacagaacaggggctc
gtctatgtctcagagggctgcccaaagcttcaatctgttctttacttttgtcgccagatg
tctaatgctgcattagtttctatagcaagaaattgtcccaagatgatacgcttccgattg
tgcataattgagccccgagctcctgattacttaacctacgaaccccttgatactggtttt
ggagccatcgtggggagatgtaaggaattgcgacgcctatccctgtcgggcctccttacg
gatcgagtttttgaatatattgggacccatgccaagaaattagagatgctttctatagct
tttgctggggatagcgacttgggcctccatcatatactgtcagggtgcgacagcctccgg
aaactggagattcgagactgtccgtttggggacaaggcacttttggctaatgcctccaag
ctggagacaatgcgatccctttggatgtcttcttgcttggtgagttttggagcatgcaaa
cttctcggtcagaagatgccgaagctcaatgttgaagttatagatgaaagaggtccccct
gattcaaggcccgaaacctgccctgtcgagaaactctacatataccggactattaccgga
cgaagattcgacatgcctggttttatttggacgatgaacgaagattcagagtcttaa
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