Primulina huaijiensis: 140989588
Help
Entry
140989588 CDS
T11038
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phua Primulina huaijiensis
Pathway
phua00040
Pentose and glucuronate interconversions
phua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140989588
Enzymes [BR:
phua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140989588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pro-MCH
Motif
Other DBs
NCBI-GeneID:
140989588
NCBI-ProteinID:
XP_073314960
LinkDB
All DBs
Position
12:5744111..5746695
Genome browser
AA seq
399 aa
AA seq
DB search
MKIPLFFILLLLNAAFILSSPVQDPEIVVQEVNEKINISRRNLGFLSCSTGNPMDDCWRC
DPDWEKNRQRLADCAIGFGKHSIGGRDGKIYVVTDSGDNAVNPKPGTLRYGVIQNEPLWI
IFARDMVVKLKQELMLNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGLNIHDCKRGGN
AYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITLSNNYL
THHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYA
IGGSADPTINSQGNRFLAPDSVENKEVTKHEDAPESKWKHWNWRSEGDLMLNGAFFIQSG
AGASSNYAKASSLSARPSSLVTSMTDGAGALSCKKGKRC
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcccacttttctttattttattattattgaatgcagctttcatattatcttca
ccagttcaagatcctgaaatagttgtccaagaagtcaatgagaaaatcaatatatcaaga
aggaacttgggatttctctcatgcagcacgggtaacccgatggacgactgctggcgttgt
gatcccgactgggaaaagaaccgccagcgtctcgcggactgcgccatcgggttcggaaaa
cactccattggtgggagagatggcaagatatacgtagtcacggactcgggggataatgct
gtgaatccaaaaccaggaactttacgctatggtgtcatccaaaacgagccattgtggatc
attttcgcccgtgacatggtggtcaaactcaagcaagaacttatgttaaactcattcaaa
accattgatggaaggggcgctagtgtgcacatagctggaggaccatgcattaccatacaa
tttgtaacaaacatcatcatacatggattgaatatacatgattgcaagcgaggggggaat
gcgtatgtgagggattcaccggagcattatggatataggaccgtgtccgatggagatggt
gtgtcgatattcggggggagccatgtttgggtcgaccattgctcgttgtctaattgtcga
gatggcctgatcgatgccatccacggctccacggctatcacgttgtcgaataattacttg
actcatcatgataaggtcatgcttttggggcatagtgatagttatacacaagataagaac
atgcaagtaaccattgccttcaaccatttcggagaagggctcgtgcagaggatgccaaga
tgcaggcatgggtattttcatgtggtgaataatgactacacacattgggaaatgtatgca
attggtggcagtgcagatcctacaataaacagccaaggcaatagatttcttgcaccagac
agtgtggaaaataaagaggtgaccaagcacgaggatgcacccgaaagcaaatggaaacac
tggaattggagatcagaaggagaccttatgctaaatggtgcattcttcattcaatctggt
gctggtgcctcgtctaattacgccaaggcgtctagcttgagtgccagaccatcgtccctg
gtgacctcgatgaccgacggagccggggcactcagctgcaagaaaggcaaacggtgctag
DBGET
integrated database retrieval system
