Primulina huaijiensis: 140989981
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Entry
140989981 CDS
T11038
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
phua Primulina huaijiensis
Pathway
phua04120
Ubiquitin mediated proteolysis
phua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140989981
04120 Ubiquitin mediated proteolysis
140989981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phua04121
]
140989981
Enzymes [BR:
phua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140989981
Ubiquitin system [BR:
phua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140989981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
FlxA
zf-RING_16
zf-RING_5
GTP-bdg_M
zf-RING_11
zf_RING_Vps8
zf-HC5HC2H
zf-RING-like
zf-RING_Vps41
Prok-RING_4
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
140989981
NCBI-ProteinID:
XP_073315665
LinkDB
All DBs
Position
12:9459521..9464293
Genome browser
AA seq
551 aa
AA seq
DB search
MMKLRTYAGLSLIATLAVIYHSFNSRGHFYPAMVYLSTSKISLVLLLNMCLVIMCILWQL
TKKIFLGSLREAEIERLNEQSWREIMEILFAITIFRQDFSVTFLGMVTALLLIKSLHWLA
QKRVEYIETTPSVPVRSHIRIVSFMGFLLLIDSIFLYNSIKYLVETRQASVSLFFSFEYM
ILATTTVSTFIKYIFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLTMYMCFFLVIFVNYG
VPLHLIRELYETFRNFKTRVADYIRYRKITSNMNDRFPDATSEELNASDATCIICREEMT
MAKKLLCGHLFHVHCLRSWLERQNTCPTCRALVVPSENGTSTSGSRADGHQQGVSASGTS
SQASSAGDGVANDNVSQHQSRLQAAAAAASIYEKSFVYPSPNTLMWSTGYALLPQTIGHS
SNTSMTNNAAGTSTSGLPQQYQFLNTTFAQSPECTFVPSQFLGFNGQVGTGSASESALDL
QMKLIENQIEFLQQQLQHLQASNCEKTMDQGSSDVKGKSASSPSSSGKSASSPSSSVVDS
TSETGNPVCTA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagttgagaacctatgccgggcttagcttaatagctacattggctgttatttac
cattcctttaacagtagagggcatttttatcctgcaatggtttatttgtcaacttcaaag
atcagtttggtgcttcttttgaatatgtgtctggttattatgtgtattttgtggcaattg
accaagaaaatcttcctgggttcactccgagaagctgaaattgaaaggctgaatgagcag
tcttggcgggaaatcatggaaatactttttgcaatcactattttcagacaagatttttca
gtgacatttcttgggatggtgacagctttacttctgatcaaatctttgcattggttggcc
caaaagagggttgaatacatcgaaactactccatctgtaccagtgagatctcatattcgc
atcgtatcatttatgggattcctcctcctcattgacagtatctttctgtacaattcaata
aaatatttggtggaaacaagacaagcctcagtttcactctttttttcatttgaatacatg
atattggcgacaacaactgtatcaaccttcatcaagtatatattctacgtcagtgacatg
ctaatggaaggacaatgggaaaagaaggctgtctacaccttttacttggagcttatccgt
gacttgctccacttgactatgtacatgtgtttcttccttgtcatttttgtgaactatggc
gtgcctcttcacttgatccgagaactttacgagaccttccgaaactttaaaacccgtgtg
gctgattacatacgttaccgaaagatcacttcaaatatgaacgatcgatttccagatgca
acctctgaagaactcaacgcaagtgatgctacatgcattatatgtcgcgaggagatgact
atggccaagaaacttctttgtgggcatcttttccacgtacactgcctgagatcgtggtta
gaaagacaaaacacgtgtcctacttgcagagctctagttgtaccttctgagaatgggaca
tctacctctggatcaagggcagatggccatcagcaaggtgtcagtgcatctggtacttcc
tctcaagcgtcttctgctggtgacggcgtggcaaatgataatgtcagccagcatcagtct
agacttcaagctgctgccgccgccgcatcaatatatgagaaatcttttgtttatccttct
ccaaatacactgatgtggtcaactggatatgctttacttcctcaaacaattggacattct
agcaacacatcaatgacaaataatgctgctggaacctctacaagtggactgcctcaacag
tatcagtttttaaacacaacctttgctcagtcaccagagtgcacttttgtcccttcacag
tttctgggttttaacgggcaagttgggacaggaagcgcatcagagtcagcactagattta
caaatgaaattgattgagaatcagattgagtttcttcaacagcagctccagcacctacag
gcatcaaattgtgagaaaacgatggatcaaggctcatctgatgtgaaggggaagtcagca
tcatcaccatcttcatctgggaagtcagcatcatcaccatcttcatctgttgtcgactca
acaagtgagactgggaatccagtatgtacagcctaa
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