Primulina huaijiensis: 140990016
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Entry
140990016 CDS
T11038
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
phua Primulina huaijiensis
Pathway
phua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140990016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phua03009
]
140990016
Ribosome biogenesis [BR:
phua03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
140990016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
140990016
NCBI-ProteinID:
XP_073315709
LinkDB
All DBs
Position
1:26350441..26352867
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AA seq
569 aa
AA seq
DB search
MMSLISQNTIPKESTKKKKRDKDEVTLAQAEEERFEGGQELDLDVKKDQNRKRGRKEKDD
TTETEQEKEMKKLENCLFGSLFSPLEFGKDDEEEGRDGVDNGSTLFFTDRSANSVLSVYE
EDVEMSKRGGEGGEGNKQRKPVWVDEEEEKISIDISKVNRLRKLRKEENESVISGSAYIA
RLRAQHVKMNPGTDWAQPNAQLRDYSSDDDSDKESGVVMASGYEDPEDIDNILRTNGDLV
VKRGMKLLPGLLEYSRLIDANVKDPSKGPVNSVQFHNNAQLLLVGGLDRKLSFFQIDGKK
NEKIQSIFLEDCPIRNASFLPDGSQVIISGRRKFAYSFDLVKARVDKIGPLTGREEKSLE
SFEVSPDSNIIAFLGHEGYILLVSSKTKELIGTLKMNGTVRSVAFTKDGQRLLSSGGDGR
IYHWDIRTMSCFHIGVDEGCINGSALCTSPVGNLFAAGSDSGIVNVYDRDEFLGSKKKPL
KAIENLTTKVDFVKFNPDAQILAISSRMKKNSLKLIHVPSFTAFSNWPPSNRTLQYPTCM
DFSPHGGFMALGNAAGKVLLYKLHHYHQA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtttgatttctcaaaacactattcccaaagagtcaaccaagaaaaagaagagg
gataaagatgaggttacacttgctcaagcagaggaagaaaggtttgaaggtggtcaagaa
cttgatttggatgttaaaaaggatcagaacagaaaacgtgggagaaaggaaaaagatgac
acaacggaaactgaacaggagaaggaaatgaagaagctggagaattgtttgtttggctcc
ttgttctcacctcttgaatttgggaaggacgatgaagaagaaggcagagatggggtcgac
aatggctccacattgttttttactgacaggtctgcgaatagtgtgttgtctgtgtatgaa
gaggatgtggagatgagtaaaagaggtggtgagggaggagagggaaacaagcaaagaaaa
cctgtttgggtggatgaagaggaggagaaaattagtatagatatatctaaagtgaacaga
ttgcgcaaactaaggaaggaagagaatgaaagtgtgatttctggatctgcatacatagca
agattgagagcgcagcatgttaaaatgaatccaggtacagactgggcacaacccaatgca
cagctgagagattatagctctgatgatgattcagataaagaaagtggggtggtgatggca
agtggttacgaggatcctgaagatattgataatatccttagaacaaatggagatcttgtt
gtaaagaggggtatgaaactattacctggccttctcgagtactcgagactgatagatgca
aatgtgaaggatccttcgaaaggtccagtaaattccgttcagttccacaataacgcacag
ttgctgcttgttggtggattggatcggaaattaagtttctttcaaattgatggaaagaag
aatgaaaagatccaaagcatattccttgaagactgtccaatcagaaatgcctctttttta
cctgatggatctcaggttatcatatcgggaagaagaaagtttgcttatagctttgattta
gtcaaagccagggtggataaaataggccctctcacgggaagggaggagaaaagtttggag
tcatttgaagtttcccctgattcaaatatcattgcttttcttggccatgaagggtatatc
ttattagtttcatccaagaccaaggaactcatcggaaccctgaaaatgaatggaactgtt
cgatcagtagcattcactaaagatgggcagcgattgctcagttctggtggtgatggccgg
atttaccactgggatataagaactatgtcttgctttcatataggtgtagatgaaggttgc
ataaatggttcagctctgtgtacttccccagttggaaatttgtttgctgctggttcagat
agtggtatcgttaatgtttatgatagagatgaattcttgggttcgaagaagaaaccactc
aaagcaatagagaacttgacaactaaggttgattttgtgaaatttaaccccgatgcccaa
attcttgctatcagctctagaatgaagaagaacagcttgaagctgattcatgttccatca
ttcactgctttctcaaactggcctccatcaaacaggacgttgcagtatccaacctgtatg
gacttcagcccgcatgggggttttatggcattgggtaatgctgctggaaaagtgctgttg
tacaagctgcatcactaccaccaggcatga
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