KEGG   Primulina huaijiensis: 140990814
Entry
140990814         CDS       T11038                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
phua  Primulina huaijiensis
Pathway
phua03030  DNA replication
phua03410  Base excision repair
phua03420  Nucleotide excision repair
phua03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    140990814
   03410 Base excision repair
    140990814
   03420 Nucleotide excision repair
    140990814
   03430 Mismatch repair
    140990814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phua03032]
    140990814
   03036 Chromosome and associated proteins [BR:phua03036]
    140990814
   03400 DNA repair and recombination proteins [BR:phua03400]
    140990814
DNA replication proteins [BR:phua03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    140990814
  DNA Replication Termination Factors
   ELG1-RFC complex
    140990814
Chromosome and associated proteins [BR:phua03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    140990814
DNA repair and recombination proteins [BR:phua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     140990814
  Check point factors
   HRAD17(Rad24)-RFC complex
    140990814
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 AAA_lid_RFC1 AAA_22 ABC_tran RuvB_N Mg_chelatase AAA_23 AAA_5 DUF815 nSTAND6 AAA_29 RsgA_GTPase AAA_2 AAA_33 AAA_16 AAA_24 nSTAND3 T2SSE TsaE
Other DBs
NCBI-GeneID: 140990814
NCBI-ProteinID: XP_073316732
LinkDB
Position
13:complement(16427470..16433025)
AA seq 354 aa
MLWVDKYRPKSLDKVIVHEEIAQNLKKLVMEQDCPHLLFYGPSGSGKKTLIMALLRQMFG
PSADKVKVENKNWKVDAGTRSIEVELTTLSSTHHVELNPSDAGFQDRYVVQEIIKEMAKS
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR
CLNMRINAPSEGEIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILLFETCRVQQY
PFTNNQVIPPMDWEEYVSEIASSIFKEQSPKRLFEVRGKLYELLINCIPPEIILKRLVYE
LLKKLDSELKHEISHWAAYYEHRLRLGQKAIFHLEAFVAKFMSIYKGFLIETFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggttgataagtatcgtcccaaatcccttgacaaggttatagtccatgaagaa
atcgcacaaaacctcaagaaattggtgatggagcaagattgcccccatttgctgttctat
ggaccttccgggtccggtaagaagacacttatcatggcccttcttagacaaatgtttggt
cctagcgcggacaaggtgaaagtagagaacaagaactggaaagttgatgctggaaccaga
tctatcgaagtagagcttacaactttgtcaagcacacaccatgtggaactcaatcccagt
gatgcaggttttcaagaccgatatgtagttcaagaaataattaaggaaatggccaaaagt
cgacctattgacactaaagggaaaaaaggtttcaaagttctagtgctaaatgaggttgac
aaactctcaagagaagcccagcactctcttcgaagaacaatggagaaatatagtgcatct
tgtagactaattctttgctgcaacagttcctccaaggttactgaagctgtccgctctcgt
tgtttgaatatgcgaataaacgctccatcagaaggggagattgtgaaggtgttggaattc
attggcaagaaagaagggctgcaactgccttcaggatttgctgatcgcatagcccagcaa
tctaataggagtctgaggagggcaatattgttgtttgaaacttgtcgtgtccaacagtac
cctttcacaaacaatcaagtgatacccccaatggattgggaggaatacgtttctgaaata
gcatcaagcatattcaaggagcagagtcctaaacggttgtttgaggtccgaggaaagctg
tacgaactgctcattaattgcattcctccagagattattttaaagaggttggtttatgaa
ctgttgaagaaattggattctgaactaaagcatgagatctctcattgggctgcatattat
gaacacagattacgtcttggccagaaagcaatatttcatcttgaagcttttgtggccaag
tttatgagcatctacaaaggtttcctcatcgagacgtttggttga

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