Primulina huaijiensis: 140990910
Help
Entry
140990910 CDS
T11038
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
phua Primulina huaijiensis
Pathway
phua04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
140990910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phua04040
]
140990910
Ion channels [BR:
phua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
140990910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
EMC3_TMCO1
IQ
Proton_antipo_C
Motif
Other DBs
NCBI-GeneID:
140990910
NCBI-ProteinID:
XP_073316864
LinkDB
All DBs
Position
13:17474166..17523424
Genome browser
AA seq
754 aa
AA seq
DB search
MSKTAVGGRPSIAYRLADFVLCELHVMFDLSGQRDKFQRLDDLNSRLSSPSSSAVSNKCG
FNIDAFGCVRHPIHSPAKSFKRGMRKGSQGLKSIGRSLGFGVSRAVFPEDLRVSEKKIFD
PQDKFLTLWNKLFVMSCILGVSVDPLFFYLPIFSQSSNCLDIDRKLAIMATTLRTVVDAF
YLIHMVLQFRTAYIAPSSRVFGRGELVIDPAKIAKRYLKCHFIIDFLAVLPLPQIIVWRF
LQRSKGSDVLATKQALLFFILLQYIPRFLRIFPLTSELKRTSGVFAESAWAGAVSYLLLY
MLASHIVGAFWYLLSVESNDTCWQKACKHTNECHKDFLYCGNQKMNGYDVWSNISSTILS
SACPVDDENNPPFDFGIFRQALSSDIVSSKNFLSKYCYCLWWGLQNLSTLGQGLQTSTYP
GESIFSIALAILGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRE
RVRRYDQYKWLETRGVDEESLVQTLPKDLRRDIKRHLCLALVKRVPLFENMDERLLDAIC
ERLKPSLFTDNTYIVREGDPVDEMIFLIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEEL
LTWALDPKSGANLPSSTRTVKALTEVEAFALSADELKFVAGQFRRLHSRQVQHTFRFYSQ
QWRTWAACFIQAAWRRYSKRKILELRKKEEEAEELAAASGNASGGSYSIGATFLASRFAA
NALRGVHRNRNLKSARELVKLQKPPEPDFTADAD
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaacagcggtaggcgggcggccatccatcgcctaccgcctagctgattttgtt
ttatgtgaattacacgtgatgtttgatctcagtgggcagcgtgacaagtttcaaaggttg
gacgacctgaactccagactttcatccccgtcatcttcagctgtatcgaacaaatgtggc
ttcaatattgatgcttttggctgtgttaggcatccaattcactctccagcaaagtccttt
aagagaggaatgaggaaaggatcccaaggactaaaatccataggccggtcccttggattt
ggcgtatctcgggcagtatttcccgaagatctcagagtgtcagagaagaagatatttgac
cctcaagacaaatttctgacactttggaacaagctttttgtaatgtcatgtattctgggt
gtatctgtggatccactttttttctatcttcccatttttagtcaatcgtcaaactgctta
gatatagatcgaaagttagcgatcatggctacgacactgcgaacagttgttgatgctttc
tatcttattcacatggttctccaatttcgaacagcttatattgctccatcatctcgagtg
tttgggagaggtgaacttgtcatagatcctgcaaaaatcgctaaacgatacttgaagtgc
cattttatcatcgatttccttgctgtgctgcccctaccacagattatcgtatggagattt
ctgcagaggtcaaaaggctctgatgtactggcgacgaaacaggcactactttttttcatt
ttgcttcagtatattcctagatttctcagaatttttccgttgacttcggaattgaaaaga
acttctggtgtcttcgctgaatctgcatgggctggtgcagtttcttatttgctgctgtac
atgctcgccagtcatatagttggggcattctggtatttgttgtctgtggaaagtaatgat
acctgctggcagaaagcttgtaaacacaccaacgaatgccacaaagatttcttatattgc
gggaatcagaagatgaatggctatgatgtctggagcaacatcagcagtactatcttaagc
tcggcttgccccgtggatgatgaaaataatccaccatttgattttggaatttttaggcag
gcgttgtcatctgacattgtttcatctaaaaacttcctgtcaaaatactgttactgtctg
tggtgggggctgcaaaatttgagcacacttggccaggggcttcaaaccagtacctaccct
ggagagtctatattcagcatcgcccttgccattttgggacttattctatttgcattgtta
attggaaacatgcagacatatcttcagtcacttactattcgacttgaagagatgagagta
aaacggcgtgactcggagcaatggatgcatcatcgcttgctcccccaagatctcagggag
cgagttagacgttatgatcaatacaagtggttggaaacacgtggtgttgatgaagaaagt
ttggtgcaaactctacccaaggatcttcgaagagatataaaacggcatctctgtctggcc
ctcgtcaaaagggtccctctcttcgagaatatggatgagaggttgcttgacgccatttgt
gagaggctcaagccttctctattcacggataatacttacattgttcgggaaggagatccc
gttgatgagatgatattcctaattcgtggtcgtcttgagagtgtgactactgatggtgga
agaagtggattcttcaacagaagtttactgaaagaaggagatttttgtggggaggagctc
ttgacctgggctcttgatcccaaatctggtgctaatctaccatcttccactcgaactgtg
aaggctttaactgaagttgaagcttttgccctttcagctgatgagctaaaatttgtcgct
ggtcagttcagacgtctccacagtagacaagtccaacacacattccgtttctactcacag
cagtggcgtacttgggctgcttgcttcattcaagcagcttggcgtcgctattcaaagagg
aaaatcttggaacttagaaagaaggaagaagaagctgaagagttagctgcagctagcggc
aatgctagtggaggttcatacagcatcggtgcaacattcctggcttctcgatttgctgca
aatgctcttcgtggagttcatagaaatcgaaatctcaagagtgctcgagagttggtcaaa
ctgcagaagcccccagagcctgattttacagcagatgctgattga
DBGET
integrated database retrieval system
