Primulina huaijiensis: 140991380
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Entry
140991380 CDS
T11038
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
phua Primulina huaijiensis
Pathway
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140991380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phua03041
]
140991380
Spliceosome [BR:
phua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140991380
Complex C
U5 SnRNP specific factors
140991380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
KapB
Motif
Other DBs
NCBI-GeneID:
140991380
NCBI-ProteinID:
XP_073317405
LinkDB
All DBs
Position
13:complement(1588085..1600121)
Genome browser
AA seq
2373 aa
AA seq
DB search
MYNNGQDMWNSNMNNLAPPGTSGSGVAAGMPPPPPPPGTSGVQPVAPPPPPSLPPSYTVV
PSEVQLDERARKWMQLNTKRYSDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKFRHD
KRVYLGALKFVPHAVYKLLENMPMPWEQVREVKVLYHITGAITFVNEIPWVVEPIYLAQW
GTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVDPLEPIQLEMDEEEDSAVH
TWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLHRLSGQLLSDLTDGNYFYLFDMESFFT
AKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPR
KVKLCIYHTPMVMYIKTEDPDLPAFYYDPLIHPITSTNKDRRDKKNYEEDEDDDFVLPEE
VEPLLSGTPIYTDTTAAGISLLFAPRPFNMRSGRMRRAEDIPLVSEWFKEHCPPSYPVKV
RVSYQKLLKCFVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNM
LNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQ
FRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGK
GPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDL
ELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYV
KSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTP
EEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREE
LGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLD
QYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTSEGQCVVMLQTKFEK
FFEKIDLTMLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQY
FGLVLDLLLLGLTRASEIAGPPQMPNEFITYHDTRIETRHPIRLYSRYIDKVHILFRFTH
EEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPR
SITTLEWENSFVSVYSKDNPNLLFSMSGFEIRILPKIRMTQEAFSNTRDGVWNLQNEQTK
ERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQ
ELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRH
SKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRR
LTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDG
KLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQ
RSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLW
QKIHESVVMDLCQVLDQVLDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWLMSKP
SLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYNRAKFMDYTTDNMSIYPAPTGVM
IGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPY
LSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVI
HTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNI
VIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRA
LHVNNEKAKMLLKPDKTIVTEAHHIWPSLSDEQWMKVEVALRDLILSDYAKKNNVNTSAL
TQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPY
EQAAFGSKTDWRVRAISATNLHLRVNHIYVNSEDIKETGFTYIMPKNILKNFICIADLRT
QISGYLFGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQP
NELPQLSPQDLAAHARILSNNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGKSNT
DAASNPHGYLPTFYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVGMKYGMKLGTPR
EYYHEDHRPTHFLEFSNLEEGETAEGDREDTFA
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaacgggcaggacatgtggaacagtaatatgaacaatctggcgccgccgggg
acgagtggaagcggcgtagctgcggggatgcctcctcctccaccgcctccgggaacaagc
ggagtgcaaccggttgctcctcctcctccgccgtctttgccgccatcgtacacagtggtt
ccgagcgaggtgcagctcgacgagagagcgaggaagtggatgcagctcaacacgaaacgg
tacagcgacaagaggaagtttggattcgttgagacgcagaaggaggacatgcctcccgaa
cacgtgaggaaaatcattcgggaccatggtgacatgtcgtcaaagaaatttcgtcacgac
aaacgtgtctatttaggagctcttaagtttgtcccacatgctgtatataaacttcttgaa
aatatgcccatgccttgggaacaggttcgtgaagtgaaggttctttaccatattactggt
gctattaccttcgtaaatgaaataccatgggttgttgaaccaatctatttagctcagtgg
ggaaccatgtggatcatgatgcgaagagagaaaagagatagacgtcacttcaagagaatg
cgctttcctccatttgatgatgaagaacccccactggactatgctgataatatcctagat
gtggatcctttggagccaatccagttagagatggatgaggaagaagattcagctgttcat
acttggttctatgatcataaacctcttgtgaaaacaaagcttataaacggacccagctac
cggaagtggcatctgtcacttccaattatggccacattacaccggctttctggacagttg
ctttctgatctgaccgatggcaattatttttacctttttgacatggagtcatttttcact
gcaaaggcactgaacatgtgcatacctggtggacctaagtttgaacctttgtatcgtgac
atggagaaaggtgatgaagattggaatgaatttaatgacattaataaacttatcatccgg
tctcctctcaggaccgagtacaggattgcattccctcacctgtataataatagacccagg
aaagtaaagctttgtatctatcacactccaatggtgatgtacataaaaaccgaggatccc
gatttacctgcattttattatgatcctcttattcatccaataacaagtacaaataaagat
agacgagataagaagaattatgaagaagatgaagatgatgattttgtcttgccggaggag
gttgaaccattactttccggaacaccgatctacactgacactacagctgctggaatttcg
cttttgtttgcgccacgcccctttaacatgcgatctggtcggatgcggcgggctgaagat
atacctcttgtatctgaatggtttaaggaacactgtcctccatcataccctgttaaagtt
cgagttagttaccagaaactgttgaaatgttttgtgttgaatgagctgcatcaccgacct
ccaaaggctcagaagaagaagcacttattcaggtctctgcaagccacaaagtttttccag
actactgaacttgattgggctgaagctggtcttcaagtttgtaagcaagggtacaatatg
ctgaatttactgatccacaggaagaatttgaactacctccaccttgactataattttaac
ttgaagcctgtgaagacccttactaccaaggaacgcaaaaagtcacggtttggtaatgct
tttcatctttgtcgtgaaattctgcgtttgacaaagcttgttgttgatgcaaatattcag
ttccggttgggaaacgtcgatgcgtttcagttggcagatgggctgcaatacattttttca
catgttggccagttaactggtatgtaccggtataaatacaggctcatgcggcagattcga
atgtgcaaagatttgaagcatttgatttattaccgatttaatactgggcctgttggaaaa
ggtcctggatgtggtttctgggcacctatgtggagggtatggttgttttttcttcgtgga
atagtgcctctcttggaaaggtggttagggaatttactcgctagacagtttgagggacgt
cattccaaaggagtggctaaaacagtgacaaagcagcgtgttgaaagccactttgatttg
gagcttcgtgctgctgtcatgcacgatgttcttgatgctatgccagagggtattaaacaa
aataaagcaagaactattttgcagcatttgagtgaagcatggcgttgctggaaagcaaat
attccctggaaggtacctggtttacctgttcccattgagaacatgatactacgttatgtc
aaatcaaaagctgattggtggacgaatgtcgctcattataatcgtgaacgtatcaggaga
ggagcaacagttgataaaactgtttgtcgaaaaaatcttggaaggttgactcgcctttgg
ctaaaggcagaacaggaacgccagcacaactacctgaaagatggcccatatgtcacacct
gaggaagcggtggcaatatacacaactactgtgcattggttggaatcaagaaaattctct
cctataccattccctccattatcttacaagcatgacacaaagcttctcattcttgctttg
gagagactgaaggaatcttatagtgttgctgtcaggctaaaccagctacaaagagaagag
ttgggtctgattgaacaggcctatgacaatcctcatgaggcattgtctcgtattaagcgt
catttgctcactcagcgtgccttcaaggaagttggcattgagttcatggatttatatagc
tatctgattccagtctatgagattgaaccacttgaaaagattactgatgcatatctcgat
cagtacctgtggtacgaaggtgataagcgccacctttttccaaattggattaagcctgca
gattcagaaccaccaccattgctagtttacaaatggtgtcagggtataaataacttacaa
ggcatttgggacactagtgaaggacagtgcgtggtgatgcttcagaccaaattcgagaaa
tttttcgaaaaaattgatctaaccatgcttaacaggcttcttcggctggttcttgaccat
aatatagctgattatgttactgcgaagaacaatgttgtcctttcgtacaaagatatgagt
catacaaactcatatgggcttattcgtggtctgcagtttgcttcttttgtggtgcagtac
tttggacttgtcttggaccttctacttcttggtcttactcgagccagtgaaattgctggt
cctccgcagatgcctaatgagtttattacataccatgacactagaatcgaaacacggcat
ccgattcggttgtactccagatacattgataaggttcatatactatttcgctttactcat
gaagaggctcgggaccttatccagcgatatctcacagagcatcctgatcccaataatgaa
aatatggttggctataataacaaaaagtgctggccaagagatgccagaatgcgactcatg
aagcatgatgtcaatctagggagaagtgtcttttgggatatgaagaaccgcctacctaga
agcatcaccacacttgaatgggagaacagctttgtgtctgtctacagcaaagacaatccg
aacttgctctttagcatgtctggatttgaaattcgtattttaccgaagataagaatgaca
caagaggctttcagcaatacaagagatggggtttggaaccttcaaaatgaacagacaaaa
gaacgcactgctgttgctttcctacgggtagatgatgaacacatgaaagtgtttgagaat
cgagtaagacagattctcatgtcctctggttcgacaacatttacaaagattgtcaacaaa
tggaatacagctcttataggccttatgacttatttccgtgaagcaactgtgcacacacag
gagctcttagatttactagtaaaatgtgaaaataaaatacagacccgtattaagattggg
ctgaattctaagatgcctagcaggttcccaccggtcatcttttacacaccaaaggaaatt
ggaggtcttggaatgctttcaatgggtcacatattgattccccagagtgatcttcggcat
agtaaacagacagacgtcggtgtgactcattttagaagtgggatgagtcatgaagaggac
cagttgattcccaatttgtatcgctacatacagccatgggagagtgagttcattgattca
cagcgtgtttgggctgaatatgcattgaagaggcaggaagcccaggcacagaatagacgt
ttaacactggaagatttggaagattcttgggatcgtggaatacctcgaattaatactcta
tttcagaaggatcgacacacccttgcttatgacaaagggtggagagtgagaactgatttt
aaacagtatcaggtcctgaaacaaaatccgttttggtggacgcaccagaggcatgatggg
aagttgtggaacttaaacaactatcgtactgatgtcattcaagctctgggaggagtcgaa
ggaattcttgagcatacattgtttaagggaacatacttccctacatgggagggtcttttc
tgggagaaagcttcaggttttgaggagtccatgaagtataagaaattaaccaatgcacaa
agatctgggctcaatcaaattcctaacagaaggtttacactttggtggtcaccaactata
aaccgagcaaacgtatatgttggtttccaagtgcagctggatcttacagggatttttatg
catggaaagataccaactcttaagatatctctgattcagatattccgtgcgcatttgtgg
cagaagatacatgagagtgtggtgatggacctttgccaggttttggatcaagtgttggat
gccctggagattgaaactgttcagaaagagacaattcatccgagaaagagctacaaaatg
aacagctcgtgtgctgacattctcctctttgccgctcatagatggcttatgtcaaagccc
agtcttgtggctgaatcgaaggatgtgtttgaccaaaaagccagcaataaatactggata
gatgttcaacttcgctggggtgactatgattcccatgatattgaacgatataacagggcg
aaatttatggattacacaacagataatatgtccatctatccagcaccaactggggtaatg
ataggacttgatcttgcctacaacttgcactctgcttttggaaattggtttcctgggtca
aaaccattacttgcccaggccatgaacaagataatgaagtcaaatccagcactatacgta
ttaagagaacgtataaggaaagggctgcagttgtattcctcagaacctacagagccttat
ctatcatctcagaactatggggaaatattcagcaatcagataatctggtttgttgatgac
acaaatgtgtatcgagtcaccattcacaagacattcgagggaaatcttacgacaaaacct
attaatggtgccatttttattttcaaccccagaactggtcaactctttctgaaggttatc
cacacaagtgtctgggctgggcaaaagcgtcttggtcagctggccaagtggaaaactgct
gaagaagttgctgctctggtacggtcattgcccgtcgaagaacagcccaagcagatcatt
gtgactcgcaagggcatgttggatccattagaggtccacttgcttgatttcccaaatatt
gtgataaaaggaagtgagctacagttaccattccaggcttgcttgaagattgagaaattt
ggtgatctaatattgaaggccacagagccacaaatggtgttgtttaacatatatgatgat
tggctgaaaagtatctcatcttacacagcattctctaggctgatattgattttgcgggct
ctccacgtcaacaatgagaaggctaagatgttgctgaagcctgacaagacaattgtcact
gaggctcatcacatctggccttcattatcggatgaacagtggatgaaggttgaagttgct
ctgagagatctcatactttccgactatgcgaagaagaacaacgtgaacacgtcagcatta
acccagtctgagatccgtgatataattcttggagctgagattactccaccttcacaacag
cggcaacaaattgctgagattgagaaacaggcaaaggaggctagtcagctcactgcagtc
actactaggaccacaaatgtgcatggtgacgaattaatagtcaccactacaagtccctat
gagcaagcagcatttggttcgaaaaccgactggcgagtaagagcaatatctgccacaaat
cttcatctccgggtgaatcacatatatgtgaactctgaagacattaaggaaactggattc
acgtacatcatgcctaaaaatattctgaagaactttatatgtattgctgacctccgcact
caaatttccgggtacctttttggcataagtcctccagacaaccctcaagtcaaagagata
cgctgtattgcaatgccccctcagtgggggactcaccagcaggttcatcttccatcagct
cttcctgagcatgatttcctgaacgatttggaacctctaggatggatgcatacacaacca
aatgaacttcctcagctgtcaccccaggaccttgcggctcatgcgcggatcttgtcaaac
aacaaacaatgggatggagagaagtgcataattctgacttgcagtttcactcctggttct
tgctctttaaccgcatataagttgaccccttctggatatgaatggggaaaaagcaacacc
gatgctgcgagtaacccccatgggtaccttccgactttctacgagaaagttcaaatgctc
ttgagtgatcgattcctcggtttctacatggtcccggacaatggtccatggaattacaat
tttatgggtgtgaaacatactgtgggcatgaaatatgggatgaaactcgggacgcctcga
gaatactatcacgaggatcatcgacctactcatttcctggagttcagcaacttggaggaa
ggcgaaactgcagaaggtgatagggaagatacctttgcttaa
DBGET
integrated database retrieval system
