Primulina huaijiensis: 140991437
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Entry
140991437 CDS
T11038
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
phua Primulina huaijiensis
Pathway
phua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140991437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140991437
03012 Translation factors [BR:
phua03012
]
140991437
Enzymes [BR:
phua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140991437
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
140991437
Translation factors [BR:
phua03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
140991437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
T2SSE
nSTAND3
Rad17
AAA_19
Motif
Other DBs
NCBI-GeneID:
140991437
NCBI-ProteinID:
XP_073317489
LinkDB
All DBs
Position
13:complement(18847407..18860656)
Genome browser
AA seq
1141 aa
AA seq
DB search
MSPRLLPNSLGGCGVFCLLQLRSPLSFAVLAKVIGCRNFLEGNFTRISTLAAMSHRPNFQ
GGRRGSGGRSRGRGGGGGGRGVGHGGGGEQRWRDPAWRAERLRQKAAEIEVMDQNEWWAK
LEQMKIGGGQEMVIRRNFSRDDQQILGDMAYELGLYFCVYGKGKALVVSKVPLPNYRADL
DERHGSNKKEISMSMETETRVGNLLNTSKGTTSAGFNSSTSADTVNELSKTVEIGRQAPM
LEIETGLNELNIELKQKQEKMRESDSVKAMLSFREKLPAFKMKSEFLKAVAAEQVLVVSG
ETGCGKTTQLPQFILEEEISSLRGGNCCIICTQPRRISAISVAARVSSERGEKLGETVGY
QIRLESKRSDETRLLFCTTGVFLRQLVEDPNLTGITHLLVDEIHERGMNEDFLLIILRDV
LPRRSDLRVILMSATINADLFSRYFGNAPSIHIPGLTFPVKEFYLEDVLEKTCYCLKTEL
ENFPGNSRRNRQSQGSKKDPLTELFEDVDINSYYKQYKASTRQSLAAWSGSQLDLDLVKA
TIEHICCNEGNGAILVFLSGWDEISNLLDKVKASNFLGDRNKFLVLPLHGSMPTINQREI
FDNPPPNVRKIILSTNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLFPSWISKASA
HQRRGRAGRVRPGVCYRLYPKIIHDAMLQYQLPEMLRTPLQELCLHIKRLQLGAISTFLS
KALQPPDALSVENAIELLKTIGALNDREELTPLGRHLSTLPLDPNIGKMLLMGSIFQCLD
PALTIAAALSDRNPFVFPINRKEEATGAKRSFAGDSCSDHIALLKAFEGWKDAKCNRMEK
SFCWDNFISPITMQMVEDMRNQFLDLLSDIGFVDKSRGAKAHNQYGDDMEMVCAMLCAGL
YPNVVQCKRRGKRTALYTKEVGKVDIHPGSVNAGVHLFPLPYMVYSERVKTSSIYIRDCT
NISDYALLMFGGNLIPSNSGDGIEMLGGYLQFSASETVLDLIRKLRGELDKLLRRKIEEP
GFDIVVEGKSVVAAVVELLHSQNVRYRYVGNGLVWRKKCTWHTSCGCRAWLPTNCFNLCG
LFGSCSVGGIRGRRNSKNHTRHGVTSRTNTCSSPASQSFGCGEDFSVSHSICHIITPIFD
E
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccccgtcttcttcccaactccctcggcggttgcggtgttttctgccttcttcag
ttacggagccctctctcatttgcggtcttggccaaagtgattggttgccggaacttcttg
gaaggaaattttactcggatctcaactttagctgccatgtctcaccgtccaaacttccaa
ggaggccgtcgtggcagtggaggccgttctagagggagaggtggcggaggaggcggcaga
ggtgtgggtcacggaggtggtggggagcagcgatggcgggaccctgcctggcgtgctgag
cgtctccgtcagaaagcggcggagattgaggtgatggaccagaatgaatggtgggcaaag
ttggaacagatgaagattggaggagggcaggagatggtaattaggaggaatttcagtaga
gatgatcagcaaatcctgggtgatatggcttatgagttgggtctttacttttgtgtgtat
ggtaaagggaaggcacttgttgtgagcaaagtaccattgccaaattatcgtgcagatctt
gatgaacgacatggctccaacaagaaagagatcagtatgtccatggagactgagacaaga
gttggaaatttattgaatacttccaaggggactacatctgcgggatttaattcttctaca
tctgctgatactgtcaatgaactatccaaaacagttgaaattgggagacaagcaccaatg
ttggagattgagactggcttgaatgaactcaatatagaactaaaacagaaacaggaaaag
atgagggaaagtgatagtgtgaaggcaatgttgtcatttagagaaaagctgccagcattc
aaaatgaaatcagaattcttgaaagctgttgcggcagaacaggtgctggtagtttcagga
gagactggttgtgggaaaaccacccagcttcctcagtttatcctggaagaggaaatatca
tctctacgcggtggtaattgttgcataatatgcactcaacctcgtagaatatctgcgata
tcagttgcagctcgagtatcatctgaaaggggagaaaagcttggtgaaactgtaggttat
caaattcgtcttgaatcaaagcgttctgatgaaacaagattgctattttgcaccactgga
gtatttcttcggcagctggtcgaggaccctaatttaacaggaattactcatttgctggtg
gacgaaattcatgaaagaggcatgaacgaggactttttgttaataatattgcgtgatgtt
ctacctcgtcgttctgaccttcgtgttatcttgatgagtgccactatcaatgctgactta
ttttcccgatactttggaaatgcacccagtatccatatccctggattgacctttcccgtg
aaagaattttatttagaagatgtgttggagaaaacatgctattgtcttaaaacagagctc
gagaattttccaggaaattcaagaagaaatcggcaatcacaaggttctaaaaaggatcct
ttgacagaattatttgaggatgtggacatcaattcctactacaaacaatacaaagcaagc
accaggcaatctcttgcagcttggtctggttctcagctggatttagatctcgttaaagcg
actattgaacacatttgttgcaatgaaggtaatggagcaattcttgttttccttagtggt
tgggacgaaatttcaaatctccttgataaagtcaaagcaagcaactttcttggagaccga
aataagtttttggtacttcctcttcatggttcaatgcctactatcaatcagcgtgaaatt
tttgataaccccccgcctaatgttagaaagataattttatctaccaacattgctgagagt
agtataaccatagatgatgttgtgtacgttgtcgactgtggaaaggcaaaagagactagc
tacgatgctcttaataagttggcttgtctttttccttcatggatatctaaggcgtcagcg
caccagagacgtggccgtgcgggtcgtgtgcgacctggagtttgctataggttatatcct
aaaataatccacgatgctatgctccagtatcaactgcctgaaatgcttcgaacacctctg
caagagttatgtctacatatcaagagattgcagcttggagcaattagtacttttttgtcc
aaggcacttcagccacctgatgctctctccgtggaaaatgccattgaacttctcaaaaca
atcggggccctaaatgatagagaagagcttacaccactcggacggcatctcagcactttg
cctctggacccaaatattggaaaaatgcttcttatgggatccatctttcagtgcctcgat
cctgcattaacaatagctgctgctctttcggatcgcaacccatttgtctttccaataaat
aggaaagaggaagccactggtgcaaagagatcctttgctggagattcttgtagtgatcac
attgcacttctgaaggcatttgaaggatggaaagatgctaaatgcaacaggatggaaaaa
tcattttgttgggataattttatatcaccaataaccatgcaaatggtggaggatatgaga
aatcagtttctggatttactctctgacattggttttgtggataaatcccgtggtgccaaa
gcacacaaccaatacggtgacgacatggagatggtatgtgcgatgctctgtgctggactc
tacccaaatgtggtgcagtgcaaacgaagaggaaagcgaacagcattgtacacaaaagaa
gttgggaaagttgacattcatccaggttcggtcaatgctggcgttcaccttttccctctt
ccatacatggtttacagcgaaagggtgaaaaccagcagtatatacattagagactgcact
aacatatctgattatgctctgctgatgttcggtgggaacctcattccgagcaatagtgga
gatggcattgaaatgcttggcggatatcttcaattttcggcatcggagactgtattagac
ttgatacggaaactgcgtggggagcttgacaaacttctaagaaggaagatcgaggagcct
ggctttgacattgtagtcgagggaaagagcgttgttgcggctgtagtcgagttattacat
agtcaaaatgtgcggtacagatatgttggtaacggacttgtgtggcgtaaaaaatgcact
tggcacacttcgtgtggctgtcgagcttggttgcccacaaattgtttcaacctgtgtggg
ctatttggaagctgttccgtgggaggaatccgaggaagaagaaattctaaaaatcatacc
aggcatggggtcacaagcagaaccaatacttgctcgtctccagccagtcaatccttcggc
tgtggtgaagatttttctgtcagccattcgatttgccacatcatcacccccatctttgat
gaatga
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integrated database retrieval system
