Primulina huaijiensis: 140991575
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Entry
140991575 CDS
T11038
Name
(RefSeq) DNA mismatch repair protein MSH2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
phua Primulina huaijiensis
Pathway
phua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140991575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phua03400
]
140991575
DNA repair and recombination proteins [BR:
phua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
140991575
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
ATG17_like
HTH_71
Nif11
Motif
Other DBs
NCBI-GeneID:
140991575
NCBI-ProteinID:
XP_073317706
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All DBs
Position
13:complement(3306807..3326657)
Genome browser
AA seq
941 aa
AA seq
DB search
MDQDLEEQNKLPELKLDAKQTQGFLSFFKRLPRDPRAIRFFDRRDYYTTHGENAIFVAKT
YYHTTTALRQLGSGSDAISSVSVSKNMFETMTRDLLLERTDHTLELYEGTGANWRLVKSG
TPGNLGSFEDILFANYDMQDSPVIVAIALNIRENIRNVGLSYIDLTRRILGLAEFPDDSH
FTNVESAIVALGCKECLLSEEINKSSEYKPLMDAFSRCGAMITERKKTEFKVRDLVQDLC
RLAKGSHDSVRDLLSEFEISPGALACIMSYVDLLADESNYGNYTVQRYDLDCYMRLDSAA
MRALNVFESKTDANKNFSLFGLLNRTCTAGMGKRLLHLWLKQPLLDVNEINSRLDLVQAF
VEDGAIRQDLRQQLKRISDIERLICCLEKKRASLVHVVKLYQSSIRLPYIKSALEQYSGQ
FCSLIRERYLDTLEKWTGDAHLNRFTSLVEVAIDLDQLENGEYMISADYDSQLSVLKSEQ
ESLGQQIHELHRNAANDLDLALDKALKLEKGTQYGHVFRITKKEEPKVRKKLNTHFIILE
TRKDGVKFTNTKLKKLSDQYQKVVEEYKNCQKELVAKVVQTVATFSEVFEGIAGPISELD
VLLGFADLAANCPTPYTRPSINPPDMGDIILEGSRHPCVEAQDWVNFIPNDCKLIRENSW
FQIITGPNMGGKSTFIRQVGVNVMMAQVGSFVPCESASISIRDCIFARVGAGDCQMRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIIEVIKAPTLFATH
FHELTSLAHDNSDDKLSSRKHIGVANFHVSAHIDQSSRKLTMLYKVEPGACDQSFGIHVA
EFANFPECVVALARAKASELEDFSPVEVLHHDAKEILPKRKRKWDSDDVSRGAERARQFL
KDFSELPLDKMDLKQALEQVNNLRDGLEKDSVNNCWLQQLF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggatttggaagaacagaataagcttcccgagcttaaacttgatgccaaacaa
actcaagggtttctttcatttttcaaaagactacctagggaccctagagctattcggttc
ttcgatcgtcgggattattatacaacccatggtgagaatgctattttcgttgcaaagacc
tattaccacactacaactgctttgcgccagctaggaagtggatctgatgccatttctagt
gttagtgtgagtaagaacatgtttgaaacaatgacccgagaccttcttttggaaaggacc
gatcacactcttgaattgtacgagggcacaggagcaaattggcgactagtgaagagtgga
acccctggaaatttggggagttttgaagacattctgtttgctaattatgacatgcaagat
tcccctgtaattgtggctattgcactgaatattcgggaaaatatacgtaatgttggtttg
agctatattgatctaactagaaggatactcggtctggctgaatttcctgatgatagtcac
ttcacaaacgtggagtcagctattgttgctctaggatgcaaagaatgccttttgtctgaa
gagattaataaatctagtgaatataaaccgttgatggatgcattttccaggtgcggtgca
atgataactgaaagaaagaaaactgaatttaaagtaagagatttggtacaggatctttgc
aggcttgcgaaagggtctcatgactcagtaagagatctgctctctgaatttgaaatctca
ccgggtgcccttgcatgtattatgtcttatgtagatttacttgcagacgagagtaattat
ggtaactatacggtccaaagatacgatttagattgttacatgagattagactctgctgct
atgagggcgctaaacgtgtttgagagcaaaacagatgctaacaaaaactttagcttattc
ggccttctgaatagaacctgtactgctggaatgggcaagcgtttacttcacttgtggctg
aaacaacctttgttagatgtaaatgagataaactctaggctggatttggtgcaagctttt
gttgaggacggcgccattcgccaagatttaaggcagcaattgaaaagaatttcagatata
gagaggcttatctgctgtcttgagaagaaaagagcaagtttggtgcatgtggttaagctt
taccagtcgagcatcaggctgccatacatcaaaagtgcattagagcagtacagtggccag
ttttgttcactgatcagagaaaggtatttggataccctagaaaaatggacaggagatgct
catttgaataggttcacaagtcttgtggaagttgcaattgaccttgatcaactagagaat
ggagaatacatgatttcagctgactatgattcacaattatctgttttgaaaagtgagcaa
gagtctctgggacagcagatacatgaattgcacagaaatgcagctaacgatcttgatctg
gccctcgataaagctctgaaactagaaaaaggcacacaatatggacatgtctttagaatt
acgaaaaaagaagaaccgaaagtaaggaagaagctaaatacccattttattattcttgaa
actcgaaaagatggggtaaaatttaccaataccaagcttaaaaaactcagtgaccaatac
caaaaggtggttgaggagtataagaactgccagaaagaattggttgcaaaggtagttcaa
actgttgctaccttttctgaggtttttgaaggaatagctgggcctatatctgaattagat
gttttacttggttttgctgatttggctgctaattgtccgactccctacacacgacctagt
atcaatccaccagatatgggagacattattttagaaggaagtcggcatccttgtgttgaa
gcacaagactgggtgaactttatcccaaatgattgcaagctaatcagggaaaatagctgg
ttccagattatcacagggcctaatatgggtggaaaatcaactttcatacgacaggttggc
gtgaatgttatgatggcacaagttggttcctttgtcccatgtgaaagcgctagcatttct
attcgtgattgtatttttgctcgagtgggtgctggtgactgccagatgcgtggagtttcg
actttcatgcaagaaatgctagagactgcatcaatcttgaaaggagctacagacaagtct
ttaataataattgatgagttaggtcgtggcacatcaacatatgatggatttggtttggct
tgggctatttgtgagcacataattgaagttataaaagcacctaccctgtttgcaactcac
tttcacgagttgacttcattagctcatgataattcagatgataagctatcttcaagaaag
catataggagtagctaatttccatgtgagtgcacacattgaccaatcaagtcgcaagctt
accatgctttacaaggttgaaccaggcgcctgtgatcaaagctttggaatacatgtagca
gaatttgccaactttccagaatgtgttgttgctcttgcccgtgcaaaggcttccgagttg
gaagatttttcgcccgtggaagttttgcaccatgatgcaaaagagattttaccaaaacgg
aagcgaaaatgggattctgatgatgtaagtaggggtgctgaacgagctcgccagttctta
aaggacttctctgagctgccgctggacaaaatggacttgaagcaagcgttggaacaagtt
aacaacttgagagatggattggagaaggattcagttaacaattgctggctccaacagttg
ttctag
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