Paraburkholderia kururiensis: U0042_13950
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Entry
U0042_13950 CDS
T10320
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
phun Paraburkholderia kururiensis
Pathway
phun03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
U0042_13950 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phun03019
]
U0042_13950 (rnc)
03009 Ribosome biogenesis [BR:
phun03009
]
U0042_13950 (rnc)
03036 Chromosome and associated proteins [BR:
phun03036
]
U0042_13950 (rnc)
Enzymes [BR:
phun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
U0042_13950 (rnc)
Messenger RNA biogenesis [BR:
phun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U0042_13950 (rnc)
Ribosome biogenesis [BR:
phun03009
]
Eukaryotic type
90S particles
RNase
U0042_13950 (rnc)
Prokaryotic type
rRNA processing factors
U0042_13950 (rnc)
Chromosome and associated proteins [BR:
phun03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
U0042_13950 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WQD80690
UniProt:
A0ABZ0WTF7
LinkDB
All DBs
Position
complement(3143438..3144874)
Genome browser
AA seq
478 aa
AA seq
DB search
MPLSPLESRLRYEFRNAELLRQALTHRSHSATHNERLEFLGDSVLNCAVAALLFQRFSKL
DEGDLSRVRANLVKQQSLYEIAQALNISESLRLGEGELRSGGFRRPSILADALEAVFGAI
FLDGGFDAAQTVIKRLYVPILDHIDPRTLGKDSKTLLQEYLQGHKIALPTYTVVATHGAA
HNQQFEVECTVPKLDVKVSGSGASRRAAEQAAAKKALEEVMAVAPALTTKPKRSKNSRAA
KAEPEVVPGVTGVQAALDLRAPERRPDRAARAAEKAAAPAEPDTERAPAVPPVVQASVPP
AAPLAVIRAAHVGSTQGLEKTSEKPAEKSIEKSAERTADRSAEKLHDKAPEKSAEKSQSK
EDTAVEKVESASAERGRSEKSERPESRADRSAERSESPDAAATAVSGTPAVKAAVADRAE
ATVHSIDRSGERSDASSGARPPADKSAAPRGRDVSSGTSEDAVAAPGAVPVRAADAGH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcccctatctccgctggaaagccgcttgcgctatgaatttcgtaatgcggaattgttg
cgccaggctttaacccaccgcagtcacagtgccacgcataatgaacggctcgaatttctg
ggcgattccgttctgaattgcgcggtggctgcccttttgttccagcgcttcagcaaactg
gacgaaggcgacctgtcgcgtgtgcgggccaatctcgtcaagcaacagtcgctgtacgag
attgctcaggccctcaatatctcggagagcctgaggttgggggaaggcgagttgcgaagc
ggcggctttcgccgtccgtccattctggccgatgcgctggaggcggtcttcggcgcgatc
ttcctcgacggcggcttcgacgccgcccagacggtcatcaagcgcctctacgtcccgatt
ctcgatcatatcgaccctcgcacgctcggcaaggattcgaagacgctgctgcaggaatac
ctgcaagggcacaagatcgcgctgcccacctataccgtggtcgctacgcatggtgcggcg
cacaatcagcagttcgaggtggaatgcacggtgccgaagctcgacgtgaaggtgtcgggc
tcaggcgcgagccgccgcgccgccgaacaggccgcggccaagaaggcgctggaagaggtg
atggccgtggcgccggcgctcacgaccaaaccgaagcgctcgaagaattcgcgtgccgcc
aaggcggagccggaagtcgtgccgggcgtaacgggcgtgcaggccgcgctggatctgcgc
gccccggaacgccgcccggatcgcgcggcacgtgccgcggaaaaggcggcggccccggcc
gaaccggataccgagcgtgcccctgctgttcctcccgtagtacaagcttcggtgccaccc
gccgcgccgctggccgtcattcgcgccgctcatgtcggctcgacccagggtctggagaaa
acgtccgaaaagccggctgagaaaagcatcgagaaatccgcggaaaggacggcggaccga
agcgctgagaagctccacgacaaagcacccgagaagagcgccgaaaagtcgcaatcgaag
gaagacactgctgtagagaaggtcgagtcagcctcggccgaacgcggtcggtccgagaaa
tccgagcgccctgagtcgcgcgccgaccgttctgccgaaaggtcggagtcccctgacgct
gccgcgacggctgtgtctggcacaccggccgtcaaggctgccgtcgcggatcgcgccgaa
gccaccgtccatagcatcgaccgctccggcgagcgtagcgacgcatcgtccggcgcgcgt
ccgcccgcggacaagtccgccgcaccgcgcggtcgcgatgtgtcgtccggcacgtccgaa
gacgcagtcgcggcgcccggcgccgtacccgtccgcgccgcggacgcgggccactga
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