Paraburkholderia kururiensis: U0042_17720
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Entry
U0042_17720 CDS
T10320
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
phun Paraburkholderia kururiensis
Pathway
phun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
U0042_17720 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phun03021
]
U0042_17720 (rpoA)
03400 DNA repair and recombination proteins [BR:
phun03400
]
U0042_17720 (rpoA)
Enzymes [BR:
phun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
U0042_17720 (rpoA)
Transcription machinery [BR:
phun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
U0042_17720 (rpoA)
DNA repair and recombination proteins [BR:
phun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
U0042_17720 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WQD75958
LinkDB
All DBs
Position
complement(3961038..3962015)
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGDNHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVVAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGDETAKIIGRIVLDASFSPVRRVS
YSVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEAAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaaacccaagatcatcgcagtggaatcgctcggcgacaaccac
gcgaaagtggtcatggagccgtttgaacgcggttatggccacaccttgggcaacgcgctt
cggcgcgtactgctgtcgtcgatggtgggctacgcgccgaccgaggtgacgatcgcaggc
gtcgtgcacgaatactcgacgctcgacggtgtgcaagaggacgtggtcaacctgttgttg
aacctgaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggtgacgctgcgc
aaggaaggcgaaggcgtcgtgacggcgggcgatatcgaactcgcgcacgactgcgaagtg
atcaatccggatcacgtggtcgcgcacctgtcgaagggtggcaagctcgacgtgcagatc
aagatcgagaagggccgtggctatgtgccgggcaacgtgcgccgctacggcgacgaaacg
gcgaagatcattggccgtatcgtgctggacgcgtcgttctcgccggtgcgtcgcgtgagc
tactcggtggaaagcgcgcgtgtcgaacagcgtaccgacctcgacaagctcgtgatgaac
atcgaaaccaacggtgtgatctcgcctgaagaggcgatccgccagtcggctcgcattctg
gtcgatcagctgtcggtgttcgcggcactggaagggaccgaagccgctgctgaagcgccg
tcacgtgctccgcaaatcgacccgattctgctgcgtccggtggacgacctcgaactcacg
gttcgttcggcgaactgtctgaaggccgagaacatctactacatcggcgacctcatccag
cgcaccgaaaacgagctgctgaagacgccgaacctgggccgcaagtcgctgaacgaaatc
aaggaagtgctcgcttcgcgcggcctcaccttgggtatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
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