Paraburkholderia kururiensis: U0042_17880
Help
Entry
U0042_17880 CDS
T10320
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phun Paraburkholderia kururiensis
Pathway
phun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0042_17880 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phun03019
]
U0042_17880 (recQ)
03400 DNA repair and recombination proteins [BR:
phun03400
]
U0042_17880 (recQ)
Enzymes [BR:
phun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0042_17880 (recQ)
Messenger RNA biogenesis [BR:
phun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U0042_17880 (recQ)
DNA repair and recombination proteins [BR:
phun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U0042_17880 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
WQD81060
LinkDB
All DBs
Position
complement(3980059..3981906)
Genome browser
AA seq
615 aa
AA seq
DB search
MSRSLEILNEVFGYPAFRGQQGEIVEHVASGGDALVLMPTGGGKSLCYQIPSLVRREAGQ
GAGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSGAEAAATERALREGDIDLLYVAPER
LMTPRFLELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPAVPRIALTATAD
AITRDEIVHRLALDDARIFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTRADGTTDAG
VVYCLSRRKVEETAEWLKGQGIRALPYHAGMEFAVRQEHQEIFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETAACRRVRLLAYFGEESGPCGNCDTCLEPPATWDATREAQMA
LSCVFRAQRASGFNFGAGHLIDVLRGNRNEKILQRGHEQLSTFGIGAALSEPEWRAIFRQ
LVAFGYLAVDHDGFGSLVLTEASKRVLKGEETVTMRRYVKPARTRQGSGRTSERADPTLG
MSAQERARWDRLRAWRTATAKSEGVPAYVIFHDATLAEIARVHPDTISDLRHIPGIGARK
LERFGDELLEVVGAD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcgctcgaaattctcaacgaagtttttggttatcccgcgttccgggggcag
cagggcgaaatcgtcgaacatgtggcgagcggcggcgacgcgctcgtgttgatgcccacg
ggcggcggcaagtcgctctgctaccagattccgtcgctcgtgcggcgggaggcggggcag
ggcgcgggcatcgtggtctccccgctcattgcgctcatgcaggaccaggtcgcggcactc
accgaagtcggcgtacgagcggcttacctgaactcgacgctttcgggcgcggaggccgcg
gccacggagcgtgcattgcgagagggcgacatcgacctgctctatgtcgcgcccgaacgc
ctgatgacaccgcgctttctcgaactgctcgagcgcacgcgcatcggcctcttcgccatc
gatgaagcgcactgcgtgtcgcaatgggggcacgacttccggccggaatatatccaactg
tcggtgctgcacgaacgctttccggcggtgccgcgcatcgcgctgacggccacggcggat
gccatcacgcgcgacgaaatcgtgcaccgtcttgcgctcgacgacgcgcgtattttcgtc
tcgagcttcgaccggcccaacatccgctaccggatcgtcgaaaaggacaacgcgcgcgct
caactgctcgacttcatccgtgccgaacacacgcgtgcggacggcaccaccgacgccggc
gtcgtgtattgcctgtcccgccgcaaggtcgaagaaacggcggagtggctgaaagggcaa
ggcatccgcgcgctgccgtaccacgccggcatggaattcgccgtgcggcaggagcaccag
gagatattccagcgcgaagagggcatcgtgatgtgcgcgacgatcgctttcggcatgggc
atcgacaagcccgacgttcgctttgtcgcgcacctggatttgcccaagagcgtggagggc
tactaccaggaaaccgggcgcgccggccgcgacggtctgccggcgaacgcgtggatggct
tacgggctgggcgacgtggtgcagcagcgcaagatgatcgacgagtccgacgccgacgac
gcgcacaagcgcgtgcagaccagcaaactggatgcgctgctcggactgtgcgaaacggcc
gcatgccgtcgtgtgcggctgctcgcgtacttcggcgaggagtccgggccgtgcggcaac
tgcgacacctgccttgagccgccggccacgtgggacgccacgcgcgaggcgcagatggcg
ctctcgtgcgtgtttcgggcgcagcgcgcgagcggcttcaacttcggcgcgggacatctg
atcgacgttctgcgcggtaaccgcaacgaaaagattcttcagcgcgggcacgaacagctg
agcaccttcggcattggagcggcgctctccgagccggaatggcgggcgatcttccggcaa
cttgtcgcgtttggctatctggcggtcgaccacgacggcttcggctcgctcgtgctcacg
gaggcgagcaagcgggtgctcaagggcgaggagaccgtgacgatgcggcgttacgtgaag
cccgcgcgcacacggcaggggtccggccgcaccagcgagcgcgccgatccgacgctcggc
atgagcgcacaggagcgggcgcgctgggacaggctgcgcgcatggcgaacggccactgcc
aaaagcgagggcgtgccggcctacgtcatttttcacgacgcaaccctggccgaaatcgcg
cgagtgcatcccgacacgatcagcgacctgcgccatattcccggcattggggcccgtaag
ttggaacggttcggcgacgaattgctcgaggtcgtgggtgctgactag
DBGET
integrated database retrieval system
