Paraburkholderia kururiensis: U0042_19100
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Entry
U0042_19100 CDS
T10320
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
phun Paraburkholderia kururiensis
Pathway
phun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U0042_19100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phun03400
]
U0042_19100
Enzymes [BR:
phun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0042_19100
DNA repair and recombination proteins [BR:
phun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U0042_19100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_16
AAA_19
AAA_22
AAA_30
ADDB_N
DUF5817
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
WQD76209
LinkDB
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Position
complement(4248330..4250585)
Genome browser
AA seq
751 aa
AA seq
DB search
MTDCFVRVALDHPLSTLFDYRCPSDGPAPVPGTLVNVPFGRREAVGLVCEVTAHSDVPPD
RLRNVTSVCCSCPPLSADWLALAAFAADYYQRGLGEVALPALPQALRDASRWDRLFAREP
RYRALPAGREALPDSLPVRASALRRLAAALLAEDALFASDARALHPKAVAVLDAWCETGW
VEREVVDPFAAGHSAAAPVAVTNPTALPVLTDEQTAALDAISGAHGFAPFLLHGVTGSGK
TEVYLRALAHLLERRPDAQALVLVPEINLTPQFEAAFRARFASLAEGAIVTLHSGLAEGE
RARNWLAAHTGHARIVLGTRLAVLASLPKLAVIVVDEEHDPAYKQQEGLRYSARDLAVWR
AKQLDVPVVLGSATPSLESWWLAEQGRYTRLTLSRRAVADAVLPVVKLIDLEDEHRRGRA
SFEGLSGPLVAAMKTRLERGEQSLVFLNRRGYAPILSCDACGWVAGCPRCSAYVVLHKPE
RALRCHHCGWESRIPRACPDCGNVDIAPMGRGTQRIEEALAQAVPGARVLRIDADSTRRK
GSAEALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFAQL
MQVSGRAGRAGLPGEVLVQTRYARHALYHALTRHDYVGFATSTLAERRDAHLPPFVYQAL
LRAEGRTLDAALAFLQQAAAALHDIPAAERVTAYDAVPMTIVKVMHVHRAQLLIESGSRA
ALQATLRAWLPALRQLKGVLRWSVEVDPLDI
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgacggactgctttgtccgcgtcgcgctggaccacccgctgtccacgctgttcgactat
cgctgcccgagcgacggaccggcgcccgtgcccggcacgctggtcaacgtgccgttcgga
cgacgcgaagcggtgggcctcgtgtgcgaagtaaccgctcacagcgacgtcccgcctgac
cgcctgcgcaacgtcacgagcgtgtgctgcagttgtcctcccctttctgccgactggctc
gcccttgccgcgttcgccgcggattactatcagcgcggtctgggcgaagtcgcgctgccg
gcgctgccgcaggcgctgcgtgatgcgtcccgttgggaccgtctgttcgcgcgcgagccg
cggtatcgcgcgctgcccgctggccgcgaagcgctgccggactcgctgcccgtgcgagcg
agcgcgctgcgtcgactggccgcggcgttgcttgccgaggacgcgctttttgcctccgac
gcgcgcgcgctccatcccaaggccgtggccgtgctcgacgcctggtgcgaaaccggctgg
gtcgagcgcgaggtggtcgacccgttcgcggccggccacagcgccgccgctcccgtcgct
gtcacgaatcccacggcgctccccgttctgaccgacgagcagaccgccgcgctcgacgcc
atctccggcgcccacggcttcgcgccgtttctgctgcacggcgtgacgggcagcggcaaa
accgaggtctatctgcgcgcacttgctcatttgctcgagcgtcgcccggatgcgcaggcc
ctcgtcctcgtgcctgaaatcaacctcacgccgcagttcgaggcggcgttccgcgcgcgc
ttcgcctcgctcgctgaaggcgccatcgtgacgctgcacagcggtctcgccgagggcgaa
cgcgcgcgcaactggctcgcggcgcacacgggccacgcgcgcatcgtgctcggcacgcgg
ctcgcggtgctcgcttcgttgccgaagcttgccgtcatcgtggtcgacgaggaacacgat
cccgcgtacaagcagcaggaaggtctgcgttactccgcgcgcgaccttgccgtgtggcgc
gccaagcagctcgacgtgccggtggtgctcggctcggcgacgccgtcgctggaaagctgg
tggctcgcggagcagggccgctacacgcgtctcacgctgtcacgccgggcggtggccgat
gcggtgctgccggtcgtgaagctgatcgatctggaggacgagcaccgccgcggccgcgcg
tcattcgaagggctctccgggccgctcgtggccgcaatgaagacgcgcctcgaacgcggc
gagcaaagcctcgtgtttctgaaccgccgcggctacgcgcccatcctctcgtgcgacgcc
tgcggctgggtggccggttgcccccgatgcagcgcctacgtcgtgctccacaagccggag
cgtgcgttgcgttgccaccattgcggctgggaatcgcgcattccgcgcgcgtgcccggac
tgcggcaacgtcgatatcgcgcccatgggtcgcggcacacagcgtatcgaggaagcgctc
gcccaggcggtgcccggcgcgcgcgtgctgcgcatcgacgcggacagcacgcgccgcaag
ggcagcgccgaagcgctgttttcggacgtgcacgcgggtgaggtggatatcctggtgggc
acgcagatgatcgcgaagggtcacgattttcagcgcgtctcgctggtgggtgtgctcaac
gcggatacggcgctcttttcccacgacttccgggccagcgaacgtcttttcgcgcagctg
atgcaggtgagcggccgcgcaggccgcgccgggctgccgggcgaagtgctggtgcagacg
cgctacgcccgccacgcgctctatcacgcgcttacacgtcacgactacgtgggcttcgcg
acatcgacgctggcggagcgccgcgacgcgcatctgccgcctttcgtctaccaggcgcta
ttgcgcgccgaagggcgcacgctcgatgccgcgctcgcgttcctccagcaggccgcggcg
gcgctgcacgacattcccgccgcggaacgcgtcaccgcctacgacgccgtgcccatgacc
atcgtgaaagtgatgcacgtgcatcgcgcgcaactgctgatcgaaagcggttcgcgcgcc
gcgctgcaagccacgctgcgtgcgtggctgccggcactgcgtcagctcaagggcgtgctg
cgctggagcgtcgaggtggatccgctcgacatctaa
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