Paraburkholderia kururiensis: U0042_19420
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Entry
U0042_19420 CDS
T10320
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
phun Paraburkholderia kururiensis
Pathway
phun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U0042_19420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phun03400
]
U0042_19420
Enzymes [BR:
phun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
U0042_19420
DNA repair and recombination proteins [BR:
phun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U0042_19420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
WQD76268
LinkDB
All DBs
Position
complement(4321280..4322239)
Genome browser
AA seq
319 aa
AA seq
DB search
MSAAAPPFTSAVSVETDTATLELPFKAPYDWPRLLRFFAGRATLGVEAVEDGAYRRAIEW
HGAEGTLTVRRHPRKRCVVATIEGAASRHADALAAPIARMFDLHANPAQIHTHLGADAWL
APLVEAAPGLRVPGAWSGFELVVRAIVGQQVSVKAATTIIGRLVQRAGCRIHGHPHESTA
WRFPTPAALAAADLDKIGMPGKRVAALQGFARAVASGDVPIDDAAVATHDAAALRASLLA
LPGIGPWTVEYVAMRAWRDPDAWPATDLVLMQSITARDPSLARPTQQRARTDAWRPWRAY
AALHLWNEVADRAGTARGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccgccgccccgcccttcacgtcggcggtgtccgttgaaacggacaccgccacg
ctggaactgccgttcaaagcaccttatgactggccgcgcctgttgcgatttttcgcgggg
cgcgcgacgctgggcgtcgaagcagtggaagacggcgcctaccgccgcgccatcgaatgg
cacggcgcggagggcacgctcaccgtgcgccggcacccgcgcaaacgctgcgtcgtcgcg
acaatcgaaggcgcggcgagccgccatgccgacgcgctcgccgcccccatcgcgcgcatg
ttcgacctgcatgcgaacccggcgcagatccacacgcaccttggcgcggacgcctggctc
gcgccgctcgtcgaggccgcgccggggctgcgcgtgccgggcgcgtggtcgggcttcgag
ctcgtggtgcgcgctatcgtcggtcagcaggtgagtgtgaaggccgcgacgaccatcatc
gggcgcctcgtgcagcgcgcgggctgccgcatccatggtcatccgcacgaaagcacggcg
tggcgctttccgacgcccgccgcgctcgccgccgcggacctcgacaagatcggcatgccg
ggcaagcgcgtcgccgcgttgcaaggctttgcgcgagcggtggcatcgggcgacgtgccc
atcgacgacgctgctgtcgccacccacgatgccgcggcattgcgcgcgtcgctgctcgcg
ttgcccggcatcggaccgtggaccgtcgagtacgtcgccatgcgggcctggcgcgatccc
gacgcatggcccgctacggacctcgtgctgatgcagtcgattaccgcacgcgacccgtcg
ctcgccaggcccacgcagcaacgcgcgcgcaccgacgcgtggcggccgtggcgcgcgtac
gcggcccttcatctatggaacgaggtggccgaccgggcgggcacggcacgcggcggttga
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