Paraburkholderia kururiensis: U0042_19990
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Entry
U0042_19990 CDS
T10320
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
phun Paraburkholderia kururiensis
Pathway
phun00300
Lysine biosynthesis
phun00470
D-Amino acid metabolism
phun01100
Metabolic pathways
phun01110
Biosynthesis of secondary metabolites
phun01120
Microbial metabolism in diverse environments
phun01230
Biosynthesis of amino acids
Module
phun_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phun00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U0042_19990 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U0042_19990 (dapF)
Enzymes [BR:
phun01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
U0042_19990 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CitF
Motif
Other DBs
NCBI-ProteinID:
WQD76362
UniProt:
A0ABZ0WG75
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All DBs
Position
complement(4444102..4444977)
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AA seq
291 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGYTQPLSLSPARVRALADRHFGVGADQLLLVEKPTIEGVDF
RYRIFNCDGGEVEHCGNGARCFVRFVRERKLTDATSIRVQVQNGVIALTVQENGEVVVDM
STPVFEPARLPFDTKGLEGRREGNDTLWPLDVNGTVRWVSAVSMGNPHAVQVVDDVEAFP
VGEDGPVIEWHPRFAQKVNAGFMQIVSRHEIRLRVYERGAGETLACGTGACAAVAAGIRR
GLLDTPVTVHTHGGVLTISWDGAHDEAAPLFMAGPATTVFEGELDLDTLPE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaaaatgcacggcgcgggcaacgacttcgtcgtgctggacggc
tacacgcagccgctctcgctgagccctgcgcgcgtgcgcgcgctcgccgaccggcatttc
ggcgtgggcgccgaccagctgctgctggtggaaaagcccacgatcgaaggcgtcgatttc
agataccgcatcttcaattgcgacggcggcgaggtcgagcattgcggcaacggcgcgcgc
tgcttcgtgcgtttcgtgcgcgaacgcaagctcaccgacgcgacgagcatccgcgtccag
gtgcagaacggcgtgattgcactcacggtgcaggagaacggcgaggtcgtcgtagacatg
agcacgcccgtgttcgagcccgcccggctgccgttcgacacgaaggggctggaaggccgc
cgcgaaggcaacgacacgctctggccgctcgacgtgaacggtacggtgcggtgggtctcg
gccgtatcgatgggcaatccgcatgccgtacaggtggtggacgacgtcgaagcgttcccc
gttggcgaagacggccccgtgatcgagtggcacccgcgcttcgcgcagaaggtgaacgcc
gggttcatgcagatcgtgtcgcgccacgagattcgcctgcgcgtctacgagcgcggcgcg
ggcgaaacgcttgcgtgcggcacgggcgcgtgcgccgcggtggcggcgggcatccggcgc
gggctgctcgacacgccggtgacggtgcacacgcacggcggcgtgctgacaatttcgtgg
gacggcgcgcacgacgaagccgcgccgctcttcatggccggcccggccacgaccgttttc
gaaggcgaactggacctggacacgctgcccgaataa
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