Paraburkholderia kururiensis: U0042_23040
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Entry
U0042_23040 CDS
T10320
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phun Paraburkholderia kururiensis
Brite
KEGG Orthology (KO) [BR:
phun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phun03032
]
U0042_23040
03400 DNA repair and recombination proteins [BR:
phun03400
]
U0042_23040
Enzymes [BR:
phun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
U0042_23040
DNA replication proteins [BR:
phun03032
]
Prokaryotic type
DNA Topoisomerases
U0042_23040
DNA repair and recombination proteins [BR:
phun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U0042_23040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WQD81130
LinkDB
All DBs
Position
complement(5130999..5132369)
Genome browser
AA seq
456 aa
AA seq
DB search
MASIASSDPAHDLQYVNDRSPGITRKRAGRRFAYFDTAGRRIRDASEIARIDALAIPPAY
TDVWICADPRGYLQATGRDARGRKQYRYHPAWREVRDATKYERMAAFGDALPRVRRRVAR
DLKLPGMPWDKVVATVVRLLDITLVRVGNAEYAKENRSYGLTTLRKKHAAIAAGKLRFRF
RGKSGVAHDVEVDDPRVASVVRRCLGLPGHELFQFVDENGALRPVSSNDINTYLREASGA
DFTAKDYRTWAGSVLALGALRRIEAQLGREAEEEAQKKAAKEAAKEAAKEAAKSAAKHAA
KDGATDRAKGAANRGTRKRKGAIHRHLVQTIKDVAQTLRNTPAVCRRCYIHPAVVDAFEQ
GELHSLAAVRTRRGLKADEALFAQLLRRHARAMRAAAREATRSATRKRAPMRARGPGHSA
RPADSSRSTSAERSSRSSHSSHSSQAGRSAGELQAS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgattgcatccagcgaccccgcgcacgacctgcaatacgtgaacgaccgcagc
cccggcatcacgcgcaagcgcgcgggccggcgcttcgcgtacttcgacaccgccggccgc
cgcatccgcgacgccagcgagatcgcacgcatcgacgcgctcgccattccgccggcctac
accgacgtctggatctgcgccgacccgcgcggctatctgcaagccaccggccgcgacgca
cgcgggcgcaagcaataccgctatcaccctgcatggcgcgaagtgcgcgacgccaccaag
tacgaacgcatggctgcgttcggcgacgcgttgccgcgcgtgcgtcgccgtgtggcgcgc
gacctgaagctgccgggcatgccgtgggacaaggtggtggccactgtcgtacggctgctc
gacatcacgctcgtgcgcgtgggcaacgccgaatacgcgaaggaaaaccgctcctacggt
ctcacgacgctgcgcaagaagcacgcggccatcgccgcgggcaagctgcgctttcgcttt
cgcggcaagagcggcgtcgcgcacgacgtcgaggtggacgacccgcgcgtggcgagcgtg
gtgcgccgttgcctcgggctgccgggccacgagctgttccagttcgtcgatgaaaacggc
gcgctgcggcccgtgagttccaacgacatcaacacctacctgcgcgaagcgagcggcgcc
gacttcacggccaaggactaccgcacgtgggcgggcagcgtgctggcgctcggcgccctc
cgacgcatcgaggcgcaactcgggcgggaggccgaagaagaagcgcagaaaaaggccgcg
aaagaggcggcaaaagaggccgcgaaggaggcggcaaaaagcgcagcgaagcatgcggca
aaagacggcgcaacagatcgggcaaaaggtgcggcgaaccgcggcaccaggaagcgcaaa
ggcgccattcatcggcatctcgtgcagaccatcaaggacgtcgcgcagaccctgcgcaac
acgcctgccgtgtgccgacgctgctacatccacccggccgtggtggatgccttcgagcaa
ggcgagcttcacagcctcgctgcggtgcgcacgcggcgcggcctcaaggccgacgaggcg
ctgttcgctcaattgctgcgccgtcatgcccgcgcgatgcgcgccgcggcgagagaggcc
acgcgttcggcgacacgcaagcgcgcgccgatgcgggcacgcggaccagggcattcggcc
cggccggcagattccagtcgttcgactagcgccgagcgttcgagccgttcaagtcattcg
agccattcgagtcaggcaggccgctcagccggcgaactccaagcgtcctga
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