Paraburkholderia kururiensis: U0042_26020
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Entry
U0042_26020 CDS
T10320
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
phun Paraburkholderia kururiensis
Pathway
phun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U0042_26020 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phun03400
]
U0042_26020 (xth)
Enzymes [BR:
phun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
U0042_26020 (xth)
DNA repair and recombination proteins [BR:
phun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
U0042_26020 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WQD77465
UniProt:
A0ABZ0WJC6
LinkDB
All DBs
Position
complement(5799097..5799873)
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AA seq
258 aa
AA seq
DB search
MKIATWNVNSLKVRQQHVIDWLELSQTDVLCLQELKLPDEKFPRAELEAKGYKSWFAGQK
TYNGVGIIVRDGIAVDEASIVRNIPGFEDEQQRVICATVEGVRVISAYFPNGQAPGTDKF
AYKLRWLNALHDWIAREIARYPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAQFE
RLIALGLVDAFRLFDQPEKSFTWWDYRMLAFRRNAGLRIDHVLLSKELALNCTVCDVDKT
PRKWDQPSDHAPVFAQIG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgctacgtggaacgtcaactccctcaaggtccgtcagcaacatgtgatcgac
tggctcgaactcagtcagaccgacgtgctgtgcctccaggaactgaagctgcctgacgag
aagtttccgcgtgccgagctcgaagcgaagggctacaagagctggttcgccggtcagaag
acctataacggcgtgggcattatcgtgcgcgacggaatcgccgtggacgaggccagcatc
gtgcgcaacattcccggcttcgaagacgagcagcagcgcgtgatctgcgcgacggtggaa
ggcgtgcgcgtgatctcggcgtactttccgaacggccaggcgcccggcaccgacaagttc
gcctacaagctgcgctggctcaacgcgttgcacgattggatcgcacgcgaaatagcacgg
tatccgaagctcgcgctgctcggcgactacaacatcgcgcccgaagaccgcgacgtgcac
gaccccaaggcatgggaaggacagaacctcgtgtcgcccgaagagcgcgcgcaattcgag
cgcctcatcgcgctcggtctcgtcgatgcgttccggctcttcgatcagcctgaaaagagc
ttcacgtggtgggactaccgcatgctcgcgttccggcgcaacgcgggtctgcgtatcgat
cacgtgctgctttcgaaagagcttgcgctcaactgcacggtctgcgacgtcgacaagacg
ccgcgcaaatgggaccagccgtcggaccacgcgccggtgtttgcgcagatcggctga
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