KEGG   Paraburkholderia kururiensis: U0042_29640
Entry
U0042_29640       CDS       T10320                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
phun  Paraburkholderia kururiensis
Pathway
phun03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phun00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0042_29640 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phun02044]
    U0042_29640 (tssM)
Secretion system [BR:phun02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0042_29640 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical RF-1 CcmD
Other DBs
NCBI-ProteinID: WQD78123
LinkDB
Position
6647856..6651770
AA seq 1304 aa
MQRFLTVLTSKRTLTIVGFIALAAVLFVGASLLDLPPLWPALVLGALIVLWLVVWIVRRL
RARRANRKLGEMLEQQAETDKAAAAAAPPARQAELDTLRARLIDAVKTIKTSKIGQVSGG
SALYELPWYIVIGNPAAGKSSAVLNSGLQFPFADKNNAVVHGIGGTRNCDWFFTTEGILL
DTAGRYSVHEEDRSEWLGFLSLLKRHRPKAPINGIIVTASIAELTGNRPEFAINLAKNLR
QRVQELTEKLEVFAPVYVMFTKADLITGFSEFFGHSDRNEYDRVWGATLPYEPDEKRDIV
ALFDERFEELYEGLKEISVAQLSISRGNKLSPGQLSFPLEFSTIKPALRAFLATLFENNP
FQYKPIFRGFYFTSALQEGETNSAAAQRIANRFGLSAEGLPQPQGAVSRYGFFLRDLFSK
VIFADKQTVRQFASPAKTRLRYATFFGFVAALALALGGWTWSTIGNQQLTANVQADLDNV
VRLQQNRSDLQSRLQAMDILEDRIEQLEQFRHDKPLSVSLGLYQGDRLEQHLLAEYYNGV
KQILLTPVSQNLASFLKDVNAHPELLAPMTRAPESGAIPVSAHAAMASTSQGGLYSDASP
TNVEDAYNALKTYLMLSDKRHVEQAHLTDQLARFWRGWLETNRGNMPRDEMIRSAERMIT
FYLSRVTDDDWPMIDENLALVDQTRENLRRVVRGMPARQRVYEEIKARASTRFAPMTVAR
IVGESNNGLVAGSYAIPGTFTREAWFQYVQPAIRDAATKELQAKDWVLNTSATDDLTLEG
SPEQIQKALVQMYKTEYAQHWQKFMQGIAVQSFGSFNQAVDAMNRLGDPQDSPIRKVLET
AYEQTSWDNPSLANTVLKSAQAGVTGWFKNLFSRAPAPAQTAANVDINGNPVELPMGPIG
QEFTGLARIVQTHDGTSLLRNYMDSLSKVRTRFNVLKNQGDPGPGARQLMQQTLDGNGSE
LADSLKLVDEQMLTGLTDSQRKALRPLLVRPLMQAYAVVIQPATVEVNKIWNAQVYQTFQ
TSLANKYPFSGDAKIEAGAGEIAQVFGPDGAIAKFVGTTLGPLAVRRGDTLTARTWGDMG
LALTPDFTNGFARWVAPLSGGAAGGGQASSEPQTVFQILPQPATGTTEYTIAIDGQQLRY
RNTPPQWTNFVWPNPQGSPGATLTATTFDGRTLQLVNEPGRYGLEKLINSAQRKRRPDGT
FDLSWTQGNVTVAVSMRIISSSQPTGGGGGSSGSGDAPQQQSLRGLRLPSSVADVSAATA
LTAPTVPAAGVSTPGTSTPGVANTGAGAQSSAVVSAASHSGSAQ
NT seq 3915 nt   +upstreamnt  +downstreamnt
atgcaacgctttctcaccgtgttgaccagtaaacgcacgctcacgatcgtcggcttcatc
gcgctcgcagcggtcctgttcgtcggcgcgagcctgctcgatctaccgccgctgtggccg
gcgctcgtgctcggtgcgctcatcgtcttgtggctcgtggtgtggatcgtgcggcgcctg
cgcgcgcggcgcgccaatcgcaagctgggcgaaatgctcgaacagcaggccgagaccgac
aaggccgcggccgccgccgcgccgcccgcgcgccaggccgaactggacacgctgcgcgcg
cgcctcatcgatgcggtcaagaccatcaagacatcgaagatcggtcaggtgtcgggcggt
tccgcgctttacgagctgccctggtacatcgtgatcggcaaccccgctgcgggcaagagc
agcgcggtgctgaactccgggctgcaattcccgttcgccgataaaaacaacgccgtggtg
cacggcattggcggcacgcgcaactgcgactggttcttcacgaccgaaggcatcctgctc
gacaccgcgggccgctattcggtgcacgaggaagaccgcagcgaatggctcggctttctc
tcgctgctcaagcggcaccggccgaaggcgcctatcaacggcatcatcgtcacagcgagc
atcgcggaactcacgggcaaccgccccgaattcgcgatcaatctcgcgaagaacctgcgc
cagcgcgtgcaggaactcacggaaaagctcgaagtgttcgcgccggtctacgtgatgttc
acgaaggccgacctcatcacaggcttcagcgaatttttcggccacagcgaccgcaacgaa
tacgaccgcgtatggggcgccacgctgccctacgaacccgacgagaagcgcgacatcgtc
gcgctcttcgacgaacgcttcgaagaactctatgaaggcctcaaagagatcagcgtcgcg
cagctctccatcagccgcggcaacaagctctcgccggggcaattgagcttcccgctcgag
ttctccaccatcaagccggcgctgcgcgcgttcctcgccacgctgttcgagaacaacccg
ttccagtacaagcccatctttcgcggcttctacttcacgagcgcattgcaggaaggcgaa
acgaacagcgccgccgcgcaacgcatcgcgaaccgcttcgggctttcggctgaaggcttg
ccccagccgcaaggcgccgtctcgcgatacggcttcttcctgcgcgacctgttctccaag
gtgatcttcgccgacaagcaaacggtgcgtcagttcgcgagcccggcaaagacgcggctg
cgctacgccactttcttcggcttcgtcgcggcgctcgcgctcgcgctgggcggctggacg
tggtccaccatcggcaatcagcaactcacggccaacgtgcaggcggatctcgataacgtg
gtgcgcctgcagcagaaccgcagcgacctgcaatcgcgcctgcaggccatggacattctc
gaagaccgcatcgagcagctcgagcagttccgccacgacaagccgctttccgtttcgctc
gggctgtaccagggcgaccggctcgagcaacatctgctggccgagtactacaacggcgtc
aagcagatcctgctcacgcccgtttcgcagaacctcgcgtcgttcctgaaggatgtgaac
gcgcatcccgaactgctcgcgcccatgacgcgcgcgcccgaatctggcgcgattcccgtc
tccgcgcatgcggcgatggcctccaccagccagggcggcctgtatagcgacgcgtcgccc
acgaacgtggaagacgcctacaacgcgctgaagacgtacctcatgctctccgacaagcgc
cacgtcgagcaggcgcacctgaccgatcaactcgcgcgcttctggcgcggctggctcgaa
acgaaccggggcaacatgccgcgcgacgagatgatccgcagcgccgaacgcatgatcacg
ttctacctctcgcgcgtcaccgacgacgactggccgatgatcgacgagaacctcgcgctc
gtcgaccagacgcgcgagaacctgcgccgcgtggtgcgcggcatgccggcacgccagcgc
gtctacgaggaaatcaaggcgcgcgcctccacgcgttttgcgccgatgacagtggcacgc
atcgtcggcgaatcgaataacggcctcgtggccggcagctacgcgattccgggcaccttc
acgcgcgaggcgtggttccagtacgtgcagcccgccattcgcgacgcggccacgaaggaa
ctgcaggcgaaggactgggtgctcaatacctcggccaccgacgacctcacgctcgaaggc
agccccgagcagatccagaaggcgctcgtgcagatgtacaagacggaatacgcacagcac
tggcagaagttcatgcagggcattgccgtgcagagcttcggcagcttcaaccaggccgtg
gacgccatgaaccgcctgggcgacccgcaggattcgcccatccgcaaggtgctcgaaacc
gcgtacgagcaaacgtcgtgggacaacccgtcgttggccaacacggtgctcaagagcgcg
caggccggcgtgactggctggttcaagaacctgttctcgcgtgcgcctgcgcctgcacaa
acggccgcgaacgtcgacatcaacggcaatccggtcgagctgcccatggggcccatcggg
caggaattcacggggcttgcgcgcatcgtgcagacgcacgacggcacgtcgctgctgcgc
aattacatggattcgctctcgaaggtccgcacgcgcttcaacgtgctgaagaaccagggc
gacccggggcccggcgcgcgtcagctcatgcagcagacgctggacggcaacggctcggaa
ctcgccgactcgctcaaactcgtggacgagcagatgctgacgggcctcaccgattcgcaa
cgcaaggcgctgcgtccgctgctcgtgcgtccgctcatgcaggcctacgcggtggtgatc
cagcccgccaccgtcgaagtgaacaagatctggaacgcgcaggtgtaccagacgttccag
acctcgcttgcgaacaagtatccgttctcgggcgacgcgaagatcgaagccggcgcgggc
gaaatcgcccaggtcttcgggccggacggtgccattgcgaagttcgtgggcacgacgctc
ggaccgctcgcggtacgccgcggcgacacgctcacggcacgcacatggggcgacatgggc
ctcgcgctcacgcccgacttcacgaacggcttcgcccgctgggtagcgccgctgtcgggc
ggcgcggcaggcggcggccaggcatcgagcgagccgcagacggtgttccagatcctgccg
cagccggccaccggcacgacggagtacaccattgccatcgacggtcaacagctgcgctac
cgcaacacgccgccgcaatggaccaacttcgtgtggccgaacccgcagggctcgccgggc
gccacgctcacggccacaacgttcgacggtcgcacgttgcaactcgtgaacgagccggga
cgctacggtctcgaaaagctcatcaactcggcgcaacgcaagcgccgcccggacggcacg
ttcgatctgtcgtggacgcaaggcaacgtcaccgtggccgtgagcatgcgcatcatcagc
agctcgcagccgacgggcggcggtggcggcagcagcggttcgggcgacgcaccgcagcag
caaagtctgcgcgggctgcggctgccctcctccgtggccgatgtcagcgctgcgacagcg
ctgacggcgcccacggttccggcagcgggcgtgtccacgccgggcacatctacgccgggc
gtcgcgaacaccggcgcaggcgcgcagtcatccgctgtcgtctcggcagcttcgcattcg
gggagtgcgcaatga

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