Pseudomonas hamedanensis: HU739_000220
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Entry
HU739_000220 CDS
T07661
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
phv
Pseudomonas hamedanensis
Pathway
phv00071
Fatty acid degradation
phv00280
Valine, leucine and isoleucine degradation
phv00310
Lysine degradation
phv00362
Benzoate degradation
phv00380
Tryptophan metabolism
phv00410
beta-Alanine metabolism
phv00640
Propanoate metabolism
phv00650
Butanoate metabolism
phv00907
Pinene, camphor and geraniol degradation
phv00930
Caprolactam degradation
phv01100
Metabolic pathways
phv01110
Biosynthesis of secondary metabolites
phv01120
Microbial metabolism in diverse environments
phv01200
Carbon metabolism
phv01212
Fatty acid metabolism
Module
phv_M00087
beta-Oxidation
phv_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU739_000220 (fadB)
00650 Butanoate metabolism
HU739_000220 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU739_000220 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU739_000220 (fadB)
00310 Lysine degradation
HU739_000220 (fadB)
00380 Tryptophan metabolism
HU739_000220 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU739_000220 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU739_000220 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU739_000220 (fadB)
00930 Caprolactam degradation
HU739_000220 (fadB)
Enzymes [BR:
phv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU739_000220 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU739_000220 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU739_000220 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU739_000220 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXI17452
UniProt:
A0A9E6TGT9
LinkDB
All DBs
Position
44515..46662
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVENFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAIEWIAAGKENRPEDAL
KVSAVDAVVAPEKLQEAALELIKRAISGEFDFKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgagctg
cgtcaggccgttgacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgagaacttcaagctg
ccggatgccgagctggttgctggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgtaccgaccgtagccgccatcaatggcatcgcgctgggcggcggtctggaa
atgtgcctggcggctgattaccgcgtcatgtccaccaaggccaagatcggcctgccggaa
gtcaagttgggcatctacccgggcttcggcggtacggtccgcctgccgcgcctgattggc
gtcgacaacgccatcgagtggattgccgccggcaaggaaaaccgtcccgaagacgcgttg
aaagtcagcgccgtcgacgccgtggttgcgcctgagaaactgcaggaagctgcccttgaa
ctgatcaagcgcgccatctccggtgagttcgatttcaaggccaagcgtcagccgaaactt
gaaaaactcaagttgaacgccattgaacagatgatggctttcgaaaccgccaaaggtttc
gtcgccggtcaggctggcccgaactacccggcgccggttgaagcgatcaagaccattcag
aaagccgccaacttcggtcgcgacaaggcgctggaagtcgaagccgccggtttcgtcaaa
ctggccaagacctctgccgcgcagagcctgatcggtctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctacgatgaaatcgccaaagacgtgaagcaggccgccgtactc
ggcgctggcatcatgggtggcggtatcgcttatcagtcggcttccaaaggtacgccgatc
ctgatgaaggacatcaacgaacacggcatcgagcagggcctggcagaagccgccaagctg
ctggtcggtcgcgttgataaaggccgcatgaccgccgcgaaaatggctgaagtgctcaac
ggtattcgtccgaccctgtcctacggtgatttcggtcacgtggatctggttgtcgaagcc
gtggtcgagaacccgaaggtcaaacaagctgtactggccgaagtcgaagacaaggtcaaa
gaggacacgatactcgcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgttggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgattcgtggtgagaagtccagcgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtcgac
ttcgtccgcatcgacaaggtcatggaaaagttcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgtgacgtgatggctgagggtttc
ccggaccgcatgaaagatgaccgtcgttcggctatcgatgtgctttacgaggccaagcgc
ctgggccagaagaacggcaagggtttctacgcctacgaggccgacaagaaaggcaagcag
aagaaagttgccgatccatcggtactggaagtgctcaagccgatcgtttacgagcagcgc
gaagtcacggacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgaaacggctgccgaggccgacatgggtctggtctac
ggcatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtg
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgcgaaatggccaagaacggccaaagcttcttcggttaa
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