Pseudomonas hamedanensis: HU739_000275
Help
Entry
HU739_000275 CDS
T07661
Name
(GenBank) DEAD/DEAH box helicase
Organism
phv
Pseudomonas hamedanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
QXI17463
UniProt:
A0A9E6P0C9
LinkDB
All DBs
Position
56012..59305
Genome browser
AA seq
1097 aa
AA seq
DB search
MSIFIERLKGLAWTRAFNSKALAKARAYADDDRVEIIEIDARKIEAFCVGSESQAYEQII
YLSEDRLGSVNLRCICTCPVAIDCKHCAAVLYSLQGSDPDVPESAAQVPLGRALEHWLST
IPVPAKPTEESAQPAGTRLFYKLKPTSASGKWLLDIFKVYQLKSGELREAKPMYSLAEML
MRQPGYLSELDLRVARLLVAMHSHHAYYSGYPLEGSSGAELLEMLLRTSRLFLDFEDLRP
LTPGAKRVGQFAWAEQADGGFRAQWSSAEAAQETVLALEPLYYLDREQRQVGPLFNELEE
KLACHLALAPDIPARQAMQFSHRMSAATKIPPPHKLTERTIDDVLPQPQLILVSGREHSR
WEYMLEHRAALVFTYNGHPALDRNPEVMILDGTETQRIQRQPAVEKKLRQSLQQHGFKKA
TRKSSLDRPGEMFTLPDDSAWLAFMHEGLATLRAANWQIEISPGFHFNVQPVEQWYAEVE
EEAGHQWFDLQLGIVVNGERYSLLPILLHLLRTQPRLLDPVNLAERSDDEKLLIELKPSG
FGGDAGAKVALPLSRVKPLMATLGELYLGGHHGDALRLTAPDAARLSLLDDVPLDWQGGE
RLRNFAKRLQNSSHTQVAAPVGLNAQLRPYQLEGLNWMQTLRELEVGGILGDDMGLGKTL
QTLAHLLTEKNAGRLDCPALAVMPTSLIPNWLDEAERFTPQLKVLALHGTGRQKDFANLA
EYDLVLTTYALLPRDLEILQPQSWSVLILDEAQNIKNPLSKAAQAARDLQARQRLCLSGT
PLENHLGELWSQFHFLMPGWLGDSKSFNRDYRTPIEKHGNVQRMQHLTARIKPFLLRRKK
DQVATELPPKTEIIHWVELSDGQRDVYETVRVAMDKKVRDEIARSGVSRSQIIILDALLK
LRQVCCDLRLINMPLSAKALRSGSGKLISLMEMLEELLGEGRRILLFSQFTSMLALIEQE
LQQRGLSYSLLTGDTADRRTPVKDFQGGKVPLFLISLKAGGTGLNLTAADTVIHFDPWWN
PAVENQATDRAYRIGQNNPVFVYKLIAKGTVEEKIQALQQEKAALAGAVLEGGTTGGFKL
EQGDIEALFAPLPVSRD
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcatcgaacggcttaaaggactggcatggacccgggcattcaacagcaag
gcgctcgccaaggcccgcgcttatgccgacgatgatcgggtagagatcatcgagatcgat
gccagaaagatcgaggcattctgcgtcggttccgaaagtcaggcgtatgaacaaatcatt
tacctgtccgaagatcgcttgggatcggttaatttgcgttgcatatgcacctgccccgtc
gcgatcgactgcaagcattgcgcggcggtgctctattctttgcagggcagtgaccctgat
gtaccggaaagtgccgcgcaggtcccgttgggtcgggcattggagcactggctttcgaca
atcccggtcccggccaaacccaccgaagaaagcgcgcaacccgcaggtacacgcctgttt
tacaagctcaagcccacgtctgcgagcggcaaatggctgctcgatattttcaaggtctac
cagctcaagagcggcgagttacgcgaagccaaaccgatgtattcgctggcggaaatgctc
atgcgccagcccggctacctgtccgagctggatttgcgcgtcgccaggctgctggttgcc
atgcactctcatcacgcctattacagcggttatccgctggagggcagcagtggcgccgaa
ctgctggaaatgctcctgcgcacctcgcggctgttcctcgatttcgaagacctgcgaccg
ctgacgccgggggcaaaacgcgtgggtcagttcgcctgggccgaacaggctgatggtggg
ttccgcgcgcagtggagcagtgccgaagctgcgcaggaaaccgtgctggcgctggagccg
ctttattacctcgatcgtgaacaacggcaggttggccctctgttcaatgagctggaagaa
aaactggcctgccatttggccctcgcaccggacattccggcgcgtcaggccatgcagttc
agccatcgaatgagtgcggcgacaaaaatcccgccgccacacaaactcaccgaacgcacc
attgatgacgtactgccgcagccgcagctgatccttgtcagcggtcgagagcactcccgc
tgggagtatatgctggagcaccgcgccgctctggtgttcacctacaacggtcatccggcg
ctggatcgcaacccggaggtgatgatcctcgacggtaccgaaacccagcgtattcaacgc
cagcccgcggtggaaaagaaactgcgtcagagcctgcaacaacacggcttcaagaaagcc
acgcgcaagagttcgctggatcgtcccggagaaatgtttacgttaccggacgattccgcc
tggctcgcattcatgcacgaagggcttgccacgctgcgcgccgcgaattggcagatcgag
atcagccccggttttcatttcaacgtgcaaccggttgagcagtggtacgccgaggtcgag
gaggaggccgggcatcaatggtttgatctgcaattgggcatcgtcgtcaacggcgagcgc
tacagcctgttgccgatccttttgcatctgttgcgcacccagccgcgcttgctcgacccg
gtcaatctggcggaacgcagcgatgatgaaaaactgctgatcgaactcaagcccagcggt
ttcggcggcgatgcgggcgccaaggtggcgttgccgctgagtcgggtcaaaccgctgatg
gccacgttaggcgagttgtatctgggcggtcatcacggcgatgcgctgcgcttgactgcg
ccggatgctgcgcgcctgagtctgctcgacgacgtgccgctggattggcagggcggcgag
cggctgcgcaactttgccaagcgcctgcaaaattccagtcacacccaagtcgctgcgccg
gttggccttaacgcgcaactgcgtccctatcagctcgaaggcctgaactggatgcaaacc
ctgcgcgagcttgaggtcggtggcattcttggcgatgacatgggcctgggcaaaaccctg
cagaccttggcgcatctgcttacggagaaaaacgccgggcggctggattgcccggcgctg
gcagtcatgccgacgagcctgattccgaactggctcgacgaggccgagcgttttactccg
cagttgaaagtattggcgctgcacgggaccgggcggcaaaaagacttcgccaatctcgcc
gaatacgacttggtgctgaccacttacgcgttgctgccgagggatcttgagattttgcag
ccacaatcgtggagcgtattgattctcgacgaagcgcaaaacatcaagaatccgctcagc
aaagccgcccaagccgcgcgtgacctgcaggcccgccagcgcctttgcctgagtggcacg
ccattggaaaaccacctcggcgaactgtggtcgcagtttcacttcctgatgccgggttgg
ctgggcgacagcaaatccttcaatcgcgattaccgcacgccgatcgagaagcacggcaac
gtgcagcgcatgcagcacctgaccgcgcgcatcaagccgtttttgttgcgacgcaaaaaa
gatcaggtcgccacggagttgccgccgaaaaccgagatcatccactgggtcgaactcagc
gatgggcagcgcgacgtgtatgaaacggtgcgtgtggcgatggacaaaaaggtccgcgac
gaaatcgcccgcagtggcgtgtcgcgcagtcagatcattattctcgatgcgctgctaaag
ctgcgtcaggtctgttgcgacttgcgcctgatcaacatgccgctctcggcgaaggccctg
cgctcgggtagcggcaagctgatcagcttgatggagatgctcgaggaattgctcggcgag
gggcgcaggattctgctgttctcccagttcacgtcgatgctggcgctgatcgagcaggag
ttgcagcaacgagggttaagttactcgttgctgaccggcgataccgcggatcgacgcacg
ccggtcaaggatttccagggcggcaaagtgccgttgttcctcatcagcctcaaggccggc
ggaacgggtttgaacctgacggcggcggacacggtgatccactttgatccttggtggaat
cctgcggtggagaatcaggccactgaccgggcgtatcgcattggccagaacaatccggtg
tttgtttacaagttgattgccaaaggcacggtggaggaaaaaatccaggcgctgcagcag
gagaaggctgcgctggccggggcggtgctggaagggggcacgacgggtggtttcaaactg
gagcagggcgatatcgaggcgctgtttgcgccgttgcctgtttccagggattga
DBGET
integrated database retrieval system
