Pseudomonas hamedanensis: HU739_001625
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Entry
HU739_001625 CDS
T07661
Name
(GenBank) RHS domain-containing protein
Organism
phv
Pseudomonas hamedanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RNAse_A_bac
DUF6531
RHS
OCRE
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
QXI17723
UniProt:
A0A9E6THI6
LinkDB
All DBs
Position
complement(371791..376575)
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AA seq
1594 aa
AA seq
DB search
MFQPDRLLALNNSIGLLAVAALNPEQPDFETLISEFRLCLNNYEAWAEQFWTGTALDIEQ
VFKVGNDVRLSAPTTSRQPISSSVVTCPASGPLTLVHLFEAARFVPIGDTPVTLEPVLSD
IDGVLTFGEPLRHTIGPSGILEVTDCQRGQRYRITFFPDVSTAHVQTLYASYEGMLAGLE
GWLRGEWTSFQPQWQEFSSAGFLDRYGQLQQADWRGLEKALNGVWDDIQQLFALLADLQA
NSEKLLEYLSEVELEALLAASSEAIASVLLMLSDEPLLFIHLAAFTSWLKMLPPQYLAEV
VAEVRVELLISFVLMRMSAGVGVPMRLSSKVLAKIKSPRAREWLAASALRLAELTSTPDF
NQHAVALKPLMLHARDVELKPTPSIPLNIRQADSVTLSVPNPAPLARGKSQGMTRLERHQ
SHDDVPEQAKNPNGDAADCSSLTCTNGCPVSMVTGEELLTLTDAVLDGVLPFEFSRLYRS
SAVEIDIGLGFGWSHSLAHRLAFDGDGVVWIDHENRRMRFPLPNAARPAIHNSLSRAAIF
LGDEPEELILALAGDSPRFYHFRAGRLTAISDVYGNRLTVQRDRADRIQRLDNGAGRSLL
LRYDRAQLVAVDYQVLVQGEWTTEQNLATYSFDARQRLLAATNAVGDSERYDYDDHHVIL
QRQLTGGASFFWEWERTGKAARCVRHWASFSQMNTRYVWNDDDASVTVHYVDGTEEVYVH
DERARLVRQVAADGGEQLKAYDEQGRLIAEQDPLGAVTEYRYDEVGRLIALIPPDDTPTS
YEYRNGFLYKRCRGEAVWIYRRNAEGAVTEAVDPDGQVTHYYYNLRGQLLSLRYPDSSRH
RWVWNELGQLIEETLPDGGVRRFSYDALGRRTTTQDEFGVISRQQWDAAGRLILTTSPTG
ASRAYSYGAYGQVTAERDELGRITRYEYDDDLHLVSRRINPDGTRVQYRYDHAQLLLTEI
ENESGEKYRLDYTPTGLIREESGFDGRRTAYAYDLNGHLLEKTEFGEHGLSLVTRYERDS
AGRLQVKTLPDGTKVSYQYDRLGRLTAVDDGQDHPLAFEYDRQDRLITEHQGWGTLRYTY
DACGQLKRMRLPDNSRLDYHYAKGGALKAIDLNGTPLTQHIYRSGREQQRQQGLLLSEYA
YDDQGRLLAHAVGHQHAALYRRDYAYSANGNLEHIADSRHGQRTYGYDALDRLIRVRHSR
DELPESFAHDPAGNLLMQDRPGPAKVKGNRLLMQGDRHYDYDAFGNLIRERRGHGHTLVT
EYRYDCQHRLIGLTRPDGQTARYQYDAFGRRIRKTVDGATTEFFWQGDQLLAESSPTQYR
SFVYEPGTFRPLALLDGKGPKKACPFYYQLDHLGTPQELTDYSGEIVWSAQYDAYGKVAA
VTLAGEEYLDQPLRFQGQYFDAESGLHYNRHRYYDPRLGRYLTPDPVKLAGGLNQYQYVP
NPTGWVDPLGLSCTPCPGATQTDGPYSELVPGGGLGAHEKRGGHFIEKHVGRTAAQLAQR
LRDEPWLSRASTFFDRATAEKAMSTVITKNQTTIDRFLLSNDTQIIISDSVSYPVGMVLK
KKSPDIRQVHGVYLLLRKDKKLPGSYRIHTGFAE
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacccgatcgactactggccctgaacaacagcatcggcctgctggcggtggcc
gcgctgaatcccgaacagccggatttcgaaaccctcatcagcgagttccgcctgtgcctg
aacaactacgaggcctgggccgagcagttctggaccgggacggcgctcgatatcgagcag
gtattcaaggtcggtaacgatgtgcggttgagcgcgccgaccacctcgcgtcagccgatc
agttcatcggtggtcacgtgcccggccagcggcccgctgaccctggtgcatttgttcgaa
gcggcgcgctttgtgcccatcggcgacaccccggtgaccctcgaaccggtgctgagcgac
atcgacggcgtgctgaccttcggtgagccattgcgccacaccatcggcccgagcgggatt
ctggaggtcaccgattgccagcggggccagcgttatcgcatcaccttctttcccgatgtg
tccaccgcccatgtgcagacgctgtatgcctcttatgaagggatgctggcgggcctggag
ggctggctgcgcggtgaatggacgagttttcagccgcaatggcaggaattttccagcgcc
ggttttctcgaccgttacgggcagttgcaacaggccgactggcgcggactggaaaaagcc
ctgaatggcgtttgggatgacatccagcagctattcgccttgctcgccgacttgcaggcg
aacagcgaaaagctcctggaatacctgagcgaggttgagcttgaggcgctgcttgccgct
tccagcgaggccattgccagcgtcttgctgatgctcagcgacgagccgctgctgttcatt
catctggccgcgttcacaagttggctgaagatgctgccgccacagtacctggccgaagtg
gtggctgaggtgcgggtcgaactgctgatcagttttgtgctgatgcgcatgtctgctggc
gttggcgtgccgatgcgcttgagcagcaaggtgctggcgaaaatcaagtcgccacgggcg
cgggaatggctggcagcttcggcgttgcgcttggctgaactgacttcgacacccgatttc
aaccagcatgcggtggcgctgaagccgttgatgcttcatgcgcgtgacgttgagctgaag
ccgacgccgtcgattccgctgaacattcggcaggcggattcggtgacgttgagcgtgccg
aatccggcgccacttgcgcggggaaaatcgcaaggcatgacgcggcttgagcgtcaccaa
tcccacgacgacgttcccgagcaagcaaaaaaccctaacggcgatgccgccgattgctcc
tcgctgacctgcaccaacggctgcccggtgtcgatggtcactggcgaggagctgctgacc
ctcaccgacgcggtactggatggcgtgctgccgttcgagttcagccgtttgtaccgcagc
agtgctgtcgagatcgatatcggcttgggtttcggctggagccattcgctggcccatcgc
ctggctttcgatggcgacggcgtcgtctggatcgaccacgaaaaccgccgcatgcggttt
cctttacccaacgctgcgcgcccggcgattcacaacagcctgtcgcgggcggcgatcttt
ctgggcgatgaaccggaagagctgatcctcgccctggccggcgacagcccgcggttttac
cactttcgcgccggccggctgacggcgatcagcgatgtgtacggcaatcgtctgaccgtg
cagcgcgatcgcgccgatcgcattcagcgcctggataacggggccggacgttcgctgttg
ttgcgctatgaccgcgcgcaactggtggcggtcgattatcaggtcttggttcagggcgag
tggaccaccgagcaaaacctcgccacctacagcttcgatgcccgccaacgcctgctggcc
gcaaccaacgcggtcggcgacagcgagcgctacgactacgacgaccatcacgtcatcctg
cagcggcaactgaccggcggcgcgagttttttctgggagtgggaacgaacaggcaaagcg
gcgcgttgcgtgcggcactgggcctcgttctcgcagatgaacacccgttacgtctggaac
gatgacgacgccagcgtgaccgtgcattacgtcgacggcaccgaagaggtctacgtccac
gacgagcgcgcgcggctggtgcggcaggtcgcagccgatggcggtgaacagctcaaggcc
tatgacgaacagggccggttgatcgccgagcaggatccgctcggtgccgtcaccgaatac
cgctacgacgaggtcgggcggctgattgcgctgattccaccggacgatacgccaacgtcc
tacgagtaccgcaacggttttctctacaagcgttgccgtggcgaggcggtgtggatctat
cggcgcaatgccgagggcgcggtcaccgaagcggtcgatcccgacggccaggtcacccat
tactactacaacctgcgtggccagttgttgtcgctgcgttacccggacagcagccggcat
cgctgggtgtggaatgaactcggccagcttatcgaggaaaccctgcccgacggtggcgtg
cggcgcttttcctacgacgcattgggacggcggaccacgacgcaggatgagtttggcgtc
atcagccgccagcagtgggacgccgctggccggctgatcctgacgacttctcctacgggc
gccagtcgcgcctacagctacggcgcttacggtcaggtcaccgccgaacgcgatgaactg
gggcgcatcacccgctacgaatatgacgacgacctgcacctggtctcgcggcgaatcaac
cccgacggcacccgcgtgcagtaccgctacgaccatgcgcaactgctgctcaccgagatc
gaaaacgaatcgggcgaaaagtaccgcctggattacacgcccaccgggctgatccgcgag
gaaagcggttttgatggccggcgcaccgcttacgcctacgacctcaacggtcacttgctg
gaaaagaccgagttcggtgagcatgggctcagtctggtcacccgttatgagcgcgacagt
gccggacgtttgcaggtcaagactctgcccgacggcaccaaggtcagctaccaatatgac
cgcctcggccgactgaccgcggtcgatgacggccaggaccacccgctggccttcgaatac
gaccgccaggaccggctgatcaccgaacatcagggctggggcaccctgcgctatacctac
gacgcctgcggccagctcaagcggatgcgcctgccggacaacagccggctcgactatcac
tacgccaagggcggtgcgctaaaagccatcgacctcaacggcacgccgctgacgcagcat
atttatcggtcagggcgcgagcagcaacgccagcaaggcctgctgctcagcgaatatgcc
tacgacgatcaggggcgcttgctcgcccacgctgtaggccatcagcacgcggcgctgtat
cgccgcgattatgcctacagcgccaacggtaacctcgagcacattgccgacagccgccac
ggccagcgcacctacggctacgacgccctcgaccgactgattcgcgtgcgtcactcgcgc
gacgaactgcccgaatccttcgcccacgacccggccggcaacctgctgatgcaggaccgc
cccggcccggcgaaggtcaagggcaaccgcctgctgatgcagggcgaccgccattacgac
tacgacgccttcggcaacctgatccgcgaacgccgcggccacggccacaccctcgtcacc
gaataccgctacgactgccagcaccgcctgatcggcctgacccgccccgacggccaaact
gcccgttaccaatacgacgccttcggccgccgcatccgcaaaaccgtggacggcgccacc
actgagttcttctggcagggcgatcaactcctcgccgaaagcagcccaacccaataccgc
agcttcgtctacgaacccggcaccttccgcccgctggccctgctcgacggcaaaggcccg
aaaaaagcctgcccgttctactaccaactcgaccacctcggcaccccgcaagaactcacc
gactacagcggcgaaatcgtctggtcggcgcaatacgacgcctacggcaaagtcgccgcg
gtgaccctggccggcgaagaatacctggaccaaccgctgcgctttcaggggcagtacttc
gatgcggaaagcggcctgcactacaaccgccaccggtattacgacccgagattgggacgt
tatctgacgccggatccggtgaagctcgcgggtggattgaatcagtaccaatacgtgccg
aatccgacgggatgggtggatccgttggggttgagttgcactccgtgtcctggagcgaca
caaaccgatggcccgtacagtgagctcgtaccgggcggcggtttaggggctcacgaaaaa
aggggcggtcacttcattgaaaagcatgtgggtcgaacagcagcccagctagctcaaaga
ctgagagatgagccttggcttagtagagcatcaactttttttgatcgagcgacagcagaa
aaagccatgtccaccgtgataacgaaaaaccagaccactattgatagattcctgctaagc
aacgatacacaaattataataagcgactctgtctcctatccagttgggatggtcttaaaa
aagaaatctcccgatataaggcaggttcatggtgtatatctactcttacgcaaagataaa
aagctaccaggctcctaccgtatacacacaggctttgcagaatga
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