Pseudomonas hamedanensis: HU739_003400
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Entry
HU739_003400 CDS
T07661
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phv
Pseudomonas hamedanensis
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phv03032
]
HU739_003400
03400 DNA repair and recombination proteins [BR:
phv03400
]
HU739_003400
Enzymes [BR:
phv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU739_003400
DNA replication proteins [BR:
phv03032
]
Prokaryotic type
DNA Topoisomerases
HU739_003400
DNA repair and recombination proteins [BR:
phv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU739_003400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXI18055
UniProt:
A0A9E6P1U3
LinkDB
All DBs
Position
complement(775752..776789)
Genome browser
AA seq
345 aa
AA seq
DB search
MSDTELTVALPADLHYVDDTQPGITRKKLRGKFCYFDPSGQRISDPEEIKRINALAVPPA
YTDVWICADPCGHLQATGRDARGRKQYRYHPRWREVRDADKYSRLREFGMALPKLRKQLE
TLLAAPGFSRDKVMATVILLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEVNGSAILFQ
FRGKSGIEHQITVKDRRLARVIKRCLEIPGQNLFQYLDENGERHTVTSSDVNAYLKTLTG
ADFTAKDYRTWAGSALALATLREIRHESDSEAKRHVVDMVKSVAKQLGNTPAVCRKCYIH
PAVVEHFMRGALAELPRPRTRKGLREEEVALAMFLERMSEMAQAS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataccgagctgaccgttgcactgccagccgacctgcattacgtcgacgacacc
cagcccggcatcacgcgtaagaagctgcgaggcaaattctgttatttcgacccgtccggt
caacgcatcagcgatcccgaggaaatcaaacgcatcaacgccctcgccgtgccgccggcg
tacaccgacgtgtggatctgcgccgatccgtgcgggcatttgcaagccaccggccgcgat
gcccgcgggcgcaaacagtaccgctatcacccgcgttggcgcgaagtgcgcgatgccgac
aaatattcgcgcctgcgcgagttcggcatggctttgccgaaactgcgcaaacagctggaa
accttgctcgccgcgcccggtttcagccgcgacaaagtcatggccacggtgattctgctg
ctcgatgcgacattgatccgcgtcggcaacacgcaatacgcgcgcgacaaccgctcctac
ggcctgaccaccctgcgcagccgccacgtcgaggtcaacggcagcgcgatcctgttccag
tttcgcggcaaaagcggcatcgaacatcagatcaccgtcaaggaccggcgcctggcgcgg
gtgatcaagcggtgccttgagattccagggcagaacctgtttcagtatctggatgaaaac
ggcgagcgccacaccgtgacctcgtccgacgtcaacgcctacctgaaaaccctcaccggt
gccgatttcaccgccaaggattaccgcacctgggcaggcagtgcgttggcattggcgaca
ttgcgcgagatccgccacgaatcggacagcgaagccaagcgccacgtggtagacatggtg
aagagtgtcgccaaacaactgggaaacacgccggcggtgtgccgcaaatgctacatccat
ccggccgtggtcgagcatttcatgcgcggcgccctcgctgaactgccacggccacgtacg
cgcaaaggcctgcgtgaagaggaagtggcgctggcgatgtttctggagcgaatgagcgag
atggcgcaagcctcctga
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