Pseudomonas hamedanensis: HU739_004640
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Entry
HU739_004640 CDS
T07661
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
phv
Pseudomonas hamedanensis
Pathway
phv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HU739_004640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phv03400
]
HU739_004640
DNA repair and recombination proteins [BR:
phv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HU739_004640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DDRGK
KH_GLD-3_2nd
Motif
Other DBs
NCBI-ProteinID:
QXI18284
UniProt:
A0A9E6P1J5
LinkDB
All DBs
Position
1077713..1078579
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AA seq
288 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDSRSMDPVGYKRINKVTGKEVTKEN
IVKGVAYEKGRYVVLSEEEIRSAHPVSTQTIDIFSFVDAEQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSKTNKVALARVVLHTRQYLAALMPLESALVLVKLRWPQEVRSLDELALGS
EVTKPQLAKGELDMAKRLVEDMSGDWSPEDYKDEFEDKIMALVEKKAHEGKIEDVETEAG
QEERKTADVIDLTELLKRSLGGKTAAKPKTKSSAKAAPAKKTRKASGG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcaatctggaaaggcgcaatcagcttcggactggtacacatccctgttgcg
ctggtttcagcgacatcctcgcaaggcgtggacttcgattggctcgacagccgcagcatg
gacccggtcggctacaagcgcatcaacaaggtcaccggcaaggaagtgaccaaggaaaac
atcgtcaagggtgtcgcctacgaaaagggccgttatgtggtactcagcgaagaggaaatc
cgctcggcgcatccggtgtcaacgcagaccatcgacatcttttccttcgtcgacgccgag
cagattcccctgcaaaacatcgacacgccctactacctggcccccgacaagcgcggtggc
aaggtctatgccttgctgcgagagacgctgagcaagaccaacaaggtcgccctcgcccgc
gtggtgctgcatacacggcaatacctcgcggcattgatgccgctggagtcggcgctggtg
ctggtgaagttgcgctggccgcaggaagtgcgcagcctcgatgagctggcattgggcagc
gaagtgaccaagccgcagttggccaagggcgagctggacatggccaaacggctggtggaa
gacatgagcggcgactggagtcccgaagactacaaggatgaattcgaagacaagatcatg
gccctggtcgagaagaaggcccacgaaggcaagatcgaggacgtcgagacagaggctggc
caggaagagcgcaagacagccgatgttatcgatctgaccgagctgcttaaacgcagcctg
ggagggaaaacggcggcgaagccgaagaccaaatcaagcgctaaggcggcgccggcgaag
aagaccaggaaggcgtcaggtggttaa
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