Pseudomonas hamedanensis: HU739_005640
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Entry
HU739_005640 CDS
T07661
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
phv
Pseudomonas hamedanensis
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phv03400
]
HU739_005640
DNA repair and recombination proteins [BR:
phv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU739_005640
Archaeal homologous recombinant proteins
HU739_005640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
nSTAND3
MMR_HSR1
AAA_22
RsgA_GTPase
cobW
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QXI18475
UniProt:
A0A9E6P2V4
LinkDB
All DBs
Position
1327376..1331017
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGYAEVDFVGVDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTLLGRRAFDKTKEAREAHKMLQDQASGVTPLAPEARAELDERF
NAAQQQLKVQQAQLKQLEQQHSWLKDLRQLQDAQQAASEQLHSAQQHWQALAGERVKLTR
LEQLGPQRHQFARKAELDALLTPLAAQIAAHTQQHAALGERQAQLEQRLDAAKVALSEAQ
QRQSENAPLLRQAFEEQSALARLIKDTASSAETRQTAEQTFKDGQSAIQALQEKQTQVAE
RLQRIAAELEQSAHLAPLSDAWSAYRDRLQQLMLIGNRLNKGQAELQSLEQNAARSAEEL
ASHKQQLEVLFKEAGAEPDAVAEQIGILGTLLQDNRKQLRAVEDLSRLWATRQDLDKRSE
ELQQRQLLAQQQRERLTQDGVKTKAELTVAEQTLSVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQANAQQVVDQLKEKLIDLRGEVGGVIAQ
QKELLQQQEQLAAQQQALAPSLDAHPLSAQLLNQDPDKRDAWLSRQSEQLNQSITQDEQR
QSALLTLQQDAARLSQQLRQAEVAHQQAAQHLSNQQHELNSDRQRLEEELTAFGPLLPAD
TLQALRLEPAATFMQLDRQIAERLTQLEQQKEELGEQQQRQQTLEKELDRQQIRSQQLQS
AEQQFNTLTEQQQNCQEKLAQLLGEHSSAEHWQQLLEQAVEQARTAETSTTEALQSVRTQ
RVQIAAELKAQQERLQALESEDKALTDKIASWRASHPELDDGGLEDLLRFDDAQVAELRQ
TLQLNEKAIEQAQVLVQERDQRLLDHQAQHNGNLDAEQLAIALVDVQNQFAASEQQCAEL
RAEQAEDQRRQNANQALAQQIAEAYAEYQRWARLSALIGSATGDTFRKIAQAYNLDLLVH
HANVQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgccattcgcttgaagaaccttgcctcgctggccgggcctttcgagatt
gatttcaccgccgagccgctggccagcgccggtctgtttgcaatcaccggcccgaccggt
gccggcaaaagcaccctgctcgacgccttgtgcctggcactgttcggcgccgttccacgc
ctgaacaacaccggccgcgacgcgaaagtcccggacgccgacggcgaaatcgccactggc
gacccgcgtaccttgctgcgccgtggtaccggcgaaggctatgccgaggtggattttgtc
ggcgtcgatggccgtcgctatagggcgcgctgggaagccaaccgcgcccgtgagaaggct
gggggcaagttgcaagcgagccggcagagcctgcgcgatatcgatcaggatcaattgctc
gcgagtcagaaaggcgaatacaaaacccaactggaagccgcgctgggcctgaacttcgaa
cagttcacccgcgccgtcctgctggcgcagagcgagttcagcgcgttcctcaaggctgac
gacaacgaccgcagcgaactgctggaaaaactcaccgacaccgcgctctacaccctcctc
ggccgccgcgctttcgacaagaccaaagaagcccgcgaagcgcacaagatgttgcaggat
caggccagcggcgtaacgccactggcacccgaagcccgtgccgaactcgatgagcgtttc
aacgccgcgcagcaacaactgaaggtgcaacaagcgcagctcaaacagcttgagcagcaa
cacagctggctcaaggatttgcgtcagttgcaggacgcgcaacaggcggccagcgaacaa
ttgcacagtgcgcagcagcattggcaggcgctggccggcgagcgggtaaaactgacgcgc
ctggagcagctcggcccgcagcggcatcagttcgcgcgcaaggccgaactcgatgcactg
ctgacgccgttggcggcgcagattgccgcacacacccaacaacacgcggcgctgggcgaa
cgtcaggcgcaactggaacaacgcctcgacgcagcgaaagtcgccctcagtgaagcgcag
cagcggcaaagcgagaatgcgccgctgttgcgtcaggcgttcgaagaacaaagtgccctc
gcccgcctgatcaaggacactgccagcagcgccgaaacccggcaaacagccgagcaaacg
ttcaaggatggccagagcgccattcaggcgttgcaggaaaaacagactcaggtcgctgag
cgcttgcagcgcatcgccgccgagcttgaacagagcgcgcatctggccccgctgagcgat
gcctggagcgcctatcgcgaccgtctgcagcaattgatgctgatcggtaaccgtttgaac
aagggccaggctgaactgcagtcccttgaacaaaacgccgcgcgcagtgctgaagagttg
gcgtcgcacaagcagcaactggaagtgctgttcaaagaggccggcgcagaaccggacgcg
gtcgccgagcagatcggcatcctcggcactctgttgcaggacaaccgcaagcaactgcgc
gccgtcgaagacttgtcgcgcctgtgggccactcggcaggatctcgacaagcgcagcgag
gagctgcaacaacgccagctcctcgcgcaacagcagcgcgaacgcctgacccaggacggc
gttaaaaccaaggccgaactgaccgtcgccgagcaaaccctcagcgtcacccgcgaactg
ctcgagcggcagcgtctggcgcgcagtgccagcgtcgaagagctgcgcgcgcagctacag
gacgaccagccctgcccggtttgtggcagcaacgagcatccgtatcatcagcccgaagcg
ctgctgcaaagccttggtcgccatgatgaaagcgaacaggccaacgcgcagcaagtggtc
gaccagctcaaggaaaaactgatcgacctgcgcggcgaagtcggcggcgtgatcgcgcaa
caaaaagagttgctgcaacagcaggaacaactcgctgcccagcaacaagccttggcccca
agccttgatgcgcatccgctgtcggcacaattgctgaaccaggaccccgacaaacgcgac
gcctggctcagtcgccagagcgagcagttgaaccagagcatcacccaggacgaacagcgc
caaagcgccttgcttacattgcagcaggacgcggcgcgtctgtcgcagcagttgcgtcag
gctgaagtcgcccaccagcaagcggcgcaacacctgagcaatcaacagcatgaactcaac
agcgaccgtcagcgtctggaagaagagctcaccgcgtttggcccgctgttgcccgctgac
actctgcaggccctgcgccttgagccagccgcgacgttcatgcagctggaccggcagatc
gccgagcgtctgacgcagcttgaacagcaaaaggaagagctgggcgaacagcagcaacgc
cagcagacgctggaaaaagaactggatcgccaacagattcgcagccagcaattgcaaagt
gccgagcagcaattcaacacgctgaccgagcaacagcagaactgtcaggaaaaacttgcg
caactgctcggcgaacacagcagcgccgagcactggcagcagttgctcgaacaggccgtc
gagcaggcccgcacggccgaaaccagcacgaccgaggcactgcaaagcgtgcgcacgcaa
cgcgtgcaaatcgcggcggaactcaaagcacagcaggaacggttgcaggcgctcgaaagt
gaagacaaagcgctcactgacaagatcgccagttggcgcgccagccatcctgaactggat
gacggcggcctcgaagacctgctgcgcttcgacgacgcgcaagtcgccgaattgcgccaa
accctccagctcaacgaaaaagccatcgaacaggcccaggtcttggtgcaggaacgcgat
cagcgtctgctcgatcatcaggcgcagcacaacggcaacctcgatgccgaacagctcgcc
atcgccctcgtcgacgtgcagaaccagttcgccgccagcgaacagcaatgcgccgaactg
cgtgccgaacaggcggaggaccagcgccggcagaacgccaaccaggcgctggcccagcag
atcgccgaggcctatgccgagtatcagcgctgggcgcgcctgagtgccttgatcggctca
gccaccggcgacaccttccgcaaaatcgcccaggcctacaacctcgatctgctggtgcat
cacgccaacgtgcaactgcgccaactggtcaaacgctatcgcctgaaacgcggcggcagc
atgctcggcctgctggtgatggatacggaaatgggcgatgaactgcgctcggtgcattcg
ttgtcgggcggcgagacgttcctcgtgtcgctggccctggcgctgggtctggcctcgatg
gcctcgagcacgctgaaaatcgaatcgctgtttatcgacgaaggttttggcagccttgat
cctgaatctctgcaattggccatggacgccctggacggtttgcaggcgcaggggcgcaag
gttgcggtgatttctcacgtgcaggaaatgcacgaacggatcccggtgcagattcaggtg
cggcgccagggtaatggtttgagtacgctggaggtgaaatga
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integrated database retrieval system
