Pseudomonas hamedanensis: HU739_006860
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Entry
HU739_006860 CDS
T07661
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
phv
Pseudomonas hamedanensis
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phv01002
]
HU739_006860
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phv01011
]
HU739_006860
Peptidases and inhibitors [BR:
phv01002
]
Cysteine peptidases
Family C82
HU739_006860
Peptidoglycan biosynthesis and degradation proteins [BR:
phv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HU739_006860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QXI18714
UniProt:
A0A9E6P270
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All DBs
Position
complement(1609568..1611181)
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AA seq
537 aa
AA seq
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MFKKYACYLSICLLAAPFVACAEEPLPPLPTLATPPAPIPVEPRSPLHAVMISLPQSCPA
IAAQLNGPALAQLQAFYEQQDWMPVWAQDSARLPTLRTQLQLLVDDGLNPNRYAVATTAP
QDGELCADIDISRQYLQALQDLHYGRLLQAHFEPLWRVDGPPHDRQAQLLSIAVPGLQDI
AAAFELARPHLVQYRNLRHLYAAQRLQALPQWQSIGSGPLLRPAMEDQRVPELARRLHSE
GYLPEPVASGNAYEGELVDAVKSFQANHSLQADGVVGPGTIAELNISPLTRRDQLRINLE
RFRWLAQDMEADGLLVNVAAAELTLYHGGQPVWQTRTQVGRAERQTPLLKSRVTRLTLNP
TWTVPPTIWKEDKLPEIRKDQTFLSRHNLQVLDANGQPLAAADIDWDNPGNVLLRQDAGP
RNPLGQMVIRFPNPFSVYLHDTPSKALFDKGPRAFSSGCVRVEHPMQLRDLLLTPAEKAR
TETLLASGSTHEFRLSTPVPILMTYWTAQVDSAGQVRYAPDIYSHDSALLVGLDRAH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaagtacgcatgctacttgagcatttgtttgctcgctgcgccgtttgtcgct
tgcgctgaggagccgctgccacccttgccgacgctggcgacgccgcctgcgccaattccg
gtcgagccacgcagcccgttacacgcggtcatgatcagcttgccgcagtcgtgtccggcc
atcgccgcgcagctcaacggcccggcactggcacaattgcaggcgttctatgaacaacag
gactggatgccggtctgggcgcaggactctgcacgattgccgacgttgcgcacgcaattg
caactgttggttgacgatggcctgaatccgaaccgctatgccgtcgcgaccaccgcaccg
caggatggcgagttatgcgccgacatcgatatcagccgccagtaccttcaggcgttgcag
gacctgcattacgggcgcctgctgcaagcgcatttcgagccgctgtggcgcgtcgacggc
ccgccgcacgatcgtcaggcgcaactgctgagtattgccgtgcccggactgcaggacatt
gcggcggcgttcgagctggcccgtccgcatctggttcagtaccgcaacctgcgccacctt
tatgcggcgcaacgactccaggccttgccgcagtggcagtccatcggcagcgggccactg
ctgcgcccggcaatggaagaccaacgcgtgccggaactggccaggcgtctgcacagcgaa
ggctatctgcctgagccggtcgcgtccggcaacgcctacgaaggcgaactggtggacgcg
gtgaaaagttttcaggccaaccactcgctgcaggctgacggcgtggtcggcccggggaca
attgccgaactgaatatcagcccgctgacccgccgcgatcagttgcgcatcaatcttgag
cggttccgctggctggcgcaggacatggaagccgacggcctgctggtcaacgtcgccgcc
gcagaactcacgctttatcacggcggccagccggtctggcaaacccgcactcaggtgggc
cgggcggagcgccagacgccgctgctcaaatcccgcgtcacgcggctgaccctcaatccg
acatggacggtgccaccgaccatttggaaagaggacaaactgccggaaatccgcaaggac
cagacctttctcagccgccataacctgcaagtgctcgatgccaacggccaaccgttggcg
gcggcggacatcgattgggacaatcccggcaatgtccttttgcgacaggacgccggcccg
cgcaatccgctggggcaaatggtcattcgcttccccaacccgttctcggtctacctgcac
gacacaccgagcaaggcgctgttcgacaagggaccgcgggcgttcagttccggatgcgta
cgggtcgaacacccgatgcaattgcgcgatctgctacttaccccggcggaaaaggcccgt
accgaaaccctgctcgccagcggcagcacccacgagttccgcctgtcgaccccggtgccc
atcctgatgacctactggaccgcacaggtcgatagcgcaggccaggtgcgttatgcgccg
gacatctacagccacgacagcgcgctgttggtagggcttgatcgggcacattga
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