Pseudomonas hamedanensis: HU739_006985
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Entry
HU739_006985 CDS
T07661
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
phv
Pseudomonas hamedanensis
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phv03016
]
HU739_006985 (thpR)
Enzymes [BR:
phv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HU739_006985 (thpR)
Transfer RNA biogenesis [BR:
phv03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HU739_006985 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
QXI18739
UniProt:
A0A9E6TIC3
LinkDB
All DBs
Position
complement(1636891..1637430)
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AA seq
179 aa
AA seq
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MMDEVRRDEPSKRLFFALDCPPAQRKAIAQWRAQLGLRSGKPVPADNFHLTLLFLGAVPL
AQIHGVCEAAGSVRTPGQALRVALDRLQVWQRAGVLSLAPEQAPPALLRLVYALEQAMLP
FGFEESTREFRPHLTLAREFRAAEPEASTPPEFLLRAERFALFESHKGRYRVLQDWSLI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaggtgcgcagggacgaaccgtcgaagcggctgtttttcgccctcgactgc
ccgccggctcagcgcaaggcgattgcgcaatggcgtgcgcagttgggtttgcgaagcggt
aaaccggtgccggccgacaattttcatctgaccctgctgtttctcggcgcggtgccgtta
gcgcagattcatggcgtctgcgaagcggctggcagcgtgcgcacgccggggcaggcgttg
agggttgcgctggatcgtttacaggtctggcaacgtgcgggggttttatcgctggcaccc
gagcaggcaccgccggcgttgttgcgtctggtctacgccctggagcaggcgatgttgcca
ttcggctttgaagagtccacccgtgagttccgcccgcacctgaccctggcgcgcgaattc
cgagcagcggaaccggaagcaagcacaccgccggaattcttgctgcgcgctgaacgcttc
gctttgttcgaatcacacaaggggcgctatcgggtgttgcaggactggtcgctgatctga
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