Pseudomonas hamedanensis: HU739_008245
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Entry
HU739_008245 CDS
T07661
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
phv
Pseudomonas hamedanensis
Pathway
phv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HU739_008245 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phv03400
]
HU739_008245 (xth)
Enzymes [BR:
phv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HU739_008245 (xth)
DNA repair and recombination proteins [BR:
phv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HU739_008245 (xth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QXI18965
UniProt:
A0A9E6THX8
LinkDB
All DBs
Position
complement(1906455..1907249)
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AA seq
264 aa
AA seq
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MKNLRIATFNVNGLRARLPNLLAWLEREQPDIACLQELKSVDSAFPAAELEAAGYGAIWQ
GQASWNGVAILARDAQPLESRRGLPGDPDDAQSRYIEAAVHGVLVGCLYLPNGNPQPGPK
FEYKLAWFDRLISYAKDLQSSDHPVVLAGDYNVVPTDMDIYNTRSWLKDALLQPQSRECY
QRLLDQGWTDSLRHLYPEERLYTFWDYFRQHWQTNSGLRIDHLLLNPALSPYLHEAGVDA
WVRNEPHASDHAPTWIRIGSRKKR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctgcgcattgccacgttcaacgtcaacggcctgcgcgcgcggctgccgaat
ctgctggcgtggctggagcgtgagcaaccggacatcgcctgcctgcaagaactgaaatcg
gtggacagcgcgtttcctgcagccgagctggaagcggccggttacggcgcgatctggcaa
ggccaggcgtcgtggaacggtgtggcgattctggcgcgggatgcacaaccgctggagagc
cggcgcgggctgcccggcgatccagacgacgcccagagccgctatatcgaagcggcggtg
cacggggtgctggtcggttgcctgtacctgcccaatggcaatccgcagccggggccgaaa
ttcgagtacaaactggcctggttcgatcgtttgatcagctacgcgaaagacctgcaaagc
agcgatcacccggtggtgctggccggtgactacaacgtcgtgcccactgacatggacatt
tacaatacccgttcctggctcaaggacgccttgctgcaaccgcaaagccgcgagtgctac
caacgtctgctggatcaaggctggaccgattccctgcggcatttgtatcccgaggaacgc
ctctacaccttctgggattatttccgccagcactggcaaaccaactccggcctgcgcatc
gaccatcttttgctgaacccggcgctgagtccgtatttgcacgaggcgggagtcgatgcc
tgggtgcgcaacgaaccgcacgccagtgatcatgcgccgacgtggattcgtatcggctcg
cgtaaaaaacgctga
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