Pseudomonas hamedanensis: HU739_011875
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Entry
HU739_011875 CDS
T07661
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
phv
Pseudomonas hamedanensis
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phv03016
]
HU739_011875 (truD)
Enzymes [BR:
phv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HU739_011875 (truD)
Transfer RNA biogenesis [BR:
phv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HU739_011875 (truD)
Prokaryotic type
HU739_011875 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
AEP-TOTE
Motif
Other DBs
NCBI-ProteinID:
QXI19659
UniProt:
A0A9E6P3W1
LinkDB
All DBs
Position
complement(2730944..2732002)
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AA seq
352 aa
AA seq
DB search
MNELQLLGPRAYGEPLGTAVLKAIAEDFQVDEVLDIPFSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTTRHKR
KLQRGAHSANGFTLRLTQFSGDGAALDQRLQLIARQGIPNYFGAQRFGHDGGNVVDARAW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWQRALVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGAGDSPATGTVHDLEQGIAAREADLRDWLIHAGMSHERRI
LRLPIGGLTWHYPQPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactgcaattgctcggcccacgggcttacggtgaacccctcggcacagcggta
ctgaaagccattgccgaagatttccaggtcgatgaagttctggatattccgttcagtggc
gacggcgaacacctgtggatctgggtggaaaagcgtggcttgaataccgaagaagcagca
cggcgaatcgccaaggccgccggcgtgccgttgcgcacggtcagttatgccggcctcaag
gatcgtcaggccctgacccgccagtggttcagcgtgcaactacccggcaaggccgatccg
gatctgtcggcggcggaaaacgacacgttgaagatcctcaagaccacgcgccacaagcgc
aagctgcaacgcggcgcgcactcggccaatggcttcaccttgcgcctgactcagttcagc
ggcgacggggctgcgctggatcagcgcctgcaactgatcgccagacaaggtattcccaat
tatttcggcgcccagcgtttcggtcatgacggcggcaacgtcgtcgatgcgcgggcgtgg
gcggcgcgcaaggccttgccggaacagcgcaacgtacgttcgcgtttgctgtcgacggcg
cgcagctttctgttcaatcaggtgctggcggcgcgcgtcgctgatggcacctggcagcgt
gcgctggtcggcgatctgctcgcgttcactgacagccgcagctttttcccggccggtgaa
gccgagtgcagcgacccgcgactggcgattctcgatctgcatccgaccggtccgcagtgg
ggggcaggtgactctccggccacagggacagtccatgatctggagcaggggatcgccgcg
cgtgaagcggatctgcgtgattggttgattcacgcgggcatgagccacgaacgtcgcatc
ctgcgactgcccattggcgggttgacgtggcattatccccagcctgacattctgcaactg
gaattcgtcctcccggccggatgcttcgccaccgtattggtgcgcgaactcgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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integrated database retrieval system
