Pseudomonas hamedanensis: HU739_011935
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Entry
HU739_011935 CDS
T07661
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
phv
Pseudomonas hamedanensis
Pathway
phv03030
DNA replication
phv03430
Mismatch repair
phv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU739_011935 (dnaE)
03430 Mismatch repair
HU739_011935 (dnaE)
03440 Homologous recombination
HU739_011935 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phv03032
]
HU739_011935 (dnaE)
03400 DNA repair and recombination proteins [BR:
phv03400
]
HU739_011935 (dnaE)
Enzymes [BR:
phv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU739_011935 (dnaE)
DNA replication proteins [BR:
phv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU739_011935 (dnaE)
DNA repair and recombination proteins [BR:
phv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU739_011935 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QXI19671
UniProt:
A0A9E6TI99
LinkDB
All DBs
Position
complement(2743603..2747124)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKALTGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLANKDPDAPLSRISLLVMNAKGYRNLTELISRGFIEGQRNGMVIVEREWV
AEASEGLIMLSAAKEGEIGMAMIGGNPAEAEALAREWMAVFPDRFYLEIQRTNRPNDEEQ
LHGAVALADKLGAPLVATNDVRFIKQEDFAAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMIELFSDIPDAVENTVEIAKRCNIEVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYT
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYDGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDDGRIVYGLGAI
KGVGEGPVEAITEARQAGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEQ
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYASHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLHTQDLKGDQLRWLGELLKRHRGACPITMEYTSPEAKTL
LQFGETWRIDPADALIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatactccctggtcgacgggctg
gtgcgaatcaagccgctggtcaaggcgctgacgggcatgaacatgccggcggtcgcggtc
accgatcagaacaacatgtgttcgctggtcaagttctataaaaacgccatgggcgcaggc
atcaagccgatctgcggcgccgacctgtggctggcgaacaaggatccggatgcgccgctg
agccgcatcagcctgttggtgatgaatgccaagggctatcgcaacctgaccgagttgatc
tcgcgcggtttcattgaaggccagcgcaacggcatggtcatcgtcgagcgcgagtgggtc
gccgaggccagcgaaggcctgatcatgctgtccgccgccaaagaaggcgagatcggcatg
gccatgattggcggcaacccggcagaggccgaggccttggcgcgcgagtggatggcggtg
ttcccggatcgtttctatctggaaatccagcgcaccaaccgcccgaacgacgaagagcaa
ctgcacggtgccgtggcgctcgccgacaagcttggcgcgccgttggtggcgaccaacgat
gtgcgcttcatcaagcaggaagacttcgccgcccacgaaacccgcgtgtgcatcggtgag
ggccgtgccctcgacgatccgcggcgttcgaagaattacagcgatcagcagtacctgaaa
agcgccgaggaaatgatcgagctgttcagcgacattcccgacgctgtcgaaaacaccgtc
gagatcgccaaacgctgcaacatcgaagtgaaactgggcacccactttttgcccaacttc
ccgattcccgatggcatgaccatcgacgaatatttccgcaaggtctccttcgacggtctc
gaagaacgactggcggtactgctgcccaaggacaccaccgaagattacgaagccaagcgc
caggtctatgtcgaccgcttgaatttcgagctggatatcatcatccagatgggcttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagagcaacggcgtgccggtc
ggtcctggccgggggtcgggtgccggctcgctggtggcttatgtccagaagattaccgat
ctcgacccgctggaatatgacctgctgttcgaacgtttcctcaacccggaacgggtctcg
atgcccgacttcgacgtcgacttctgtatggacggccgtgaccgggtgatcgactacgtg
gccgagaagtacggccgcaatgcggtcagccagatcatcacgttcggttccatggccgcc
aaggctgtggtccgcgacgtggcgcgggtgcagggcaagtcctacggcctggccgatcgc
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgtgacttcatcaaggtcgatgaagaagcggcggaaatctgggaaatggcg
cgcaagctcgagggcgtggtgcgtaacgtcggtaaacacgccggtggtgtggtcatcgcg
ccgaccaagctgaccgacttctcgccgatctactgcgacgaggccggcgacggtctggtg
acccagttcgacaaggacgacgttgaggcggccggtctggtgaagttcgacttcctcggc
ctgcgaaccctgacgatcatcgactgggcgctgaaaaccatcaaccgcgaccgcgccaag
gtcaacgagccgccactggatatcgcgtttatcccgctggacgacaaaccgacctacacg
ctgctgcaaaaagccgaaaccacggcggtgttccagcttgagtcgcggggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggcactgttc
cgtccaggtccgctgcaatcgggcatggtggacgacttcatcaaccgtaagcacggtcgc
gccgaattggcctacccgcactcggattaccagtacgacggcctcaagccagtcctggca
ccgacttacggcatcatcctgtaccaggaacaggtgatgcagattgcccaggtcatggcc
ggttacaccctcggcggtgcggacatgctgcggcgagccatgggtaagaaaaaacccgaa
gaaatggccaagcagcgcggcggcttcattgaaggttgtgcgaccaacggcatcgacgcc
gatctggccggtaacattttcgacctggtggaaaaattcgccggttacggcttcaacaaa
tcccactccgccgcctacggcctggtgtcgtaccagaccgcctggctgaaagcccactat
ccggcgccgttcatggccgcggtactctcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcgcacgatgaagctgcgcctcgacgcgccggacgtgaacacc
tctgagttcaagttcacggtgaacgacgacggccgcatcgtctacggcctcggcgcgatc
aaaggcgtcggtgaaggtccggtggaagcgatcactgaagcgcgtcaggccggtccgttc
aaggatctgttcgatttctgcgcccgcgtcgacctcaaacgcatcaacaagcgcaccctc
gacggtttgatccgcagcggtgccctggatcgtctgggcccgtacttccatgacgagcaa
aaggcttatcaggccaacatcgaccgcaaccgcgccgtgctgctggcggcgatggaagag
gcgatcaaggctgccgagcagaccgcgcgtacccacgactccggtcacgccgacttgttt
ggcggcttgttcgtcgaggaagacgccgatgtttacgccagccatcgcaaggccaaggag
ctgaccctgaaggaacgcctcaaaggtgaaaaagacaccttgggcctgtacctgaccggt
cacccgattgacgagtacgaaggcgagattcgccgtttcgcccgtcagcgcatcatcgac
ctgaaaccggcccgcgacacccagaccgtggcgggaatgatcattgccctgcgggtgatg
aagaacaaaaagggcgacaagatgggcttcatcaccctcgacgaccgctcggggcggatc
gaggcgtcgctgtttgccgaagcgttccattcggcgcaatcgctgttgcagaccgacgcg
atggtggtggtcgaaggcgaagtcagcaacgacgacttctccggcggcctgcgcctgcgg
gtcaagcgggtgatgagcatggaggatgcgcgcaccaacctggccgagagcttgcgcctg
aaactgcacacccaggacctcaaaggcgatcagctacgctggttgggtgagttgctcaag
cgtcatcgtggcgcctgcccgatcaccatggagtacaccagccccgaagcgaagaccttg
ctgcagttcggcgagacctggcggatcgacccggcggatgcgttgattcaagcactgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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integrated database retrieval system
