Pseudomonas hamedanensis: HU739_013685
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Entry
HU739_013685 CDS
T07661
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phv
Pseudomonas hamedanensis
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phv03016
]
HU739_013685 (truB)
Enzymes [BR:
phv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HU739_013685 (truB)
Transfer RNA biogenesis [BR:
phv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HU739_013685 (truB)
Prokaryotic type
HU739_013685 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QXI14986
UniProt:
A0A9E6NW14
LinkDB
All DBs
Position
complement(3147198..3148115)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGRADVEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQDWPLLHFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctggacaagccg
ttggggttcacctccaacgccgccttgcagaaggtgcgctggctgctcaatgccgagaag
gccgggcacaccggcagcctcgacccgctggccaccggcgtgctgccgttgtgctttggc
gaggcgaccaagttctcgcaatacctgctcgattccgacaagggctacgagactctggcg
caattgggcaagaccaccaccacggccgatgccgaaggtgaggttttgcaggagcgtccg
gtgaccgttggtcgcgccgatgtcgaagcggtgctgccgaaatttcgcgggcaaatcagt
cagataccgccgatgtactcggcgctcaagcgtgatggccagccgttgtacaaactggca
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggccttcgaaggcgatactgcgcggcttgcggtggactgcagcaagggcacctatatt
cgcaccctggtggaggatatcggtgagcaactcggttgtggtgcgtacgtcgcagaactg
cgtcggacccaggccgggccttttaccctggcgcaaaccgtgaccctcgaagagctggaa
gcggtacatgccgaaggcggcaacgaagcggtcgatcgcttcctgatgccatcggacagc
ggcctgcaggattggccgttactgcacttctccgaagcgagcgcgttctactggctcaac
ggccagccggtgcgtgccccggatgcgccgaagttcggcatggtgcgggtacaggatcac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcgc
ttgattcggtcagaatga
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