KEGG   Pseudomonas hamedanensis: HU739_013895
Entry
HU739_013895      CDS       T07661                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
phv  Pseudomonas hamedanensis
Pathway
phv02020  Two-component system
Brite
KEGG Orthology (KO) [BR:phv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HU739_013895
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:phv02022]
    HU739_013895
Two-component system [BR:phv02022]
 NtrC family
  HydH-HydG (metal tolerance)
   HU739_013895
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg AAA_5 AAA_2 Mg_chelatase AAA_16 AAA HTH_11 HTH_23 HTH_AsnC-type AAA_22 HTH_8 RWP-RK nSTAND3 MCM AAA_7
Other DBs
NCBI-ProteinID: QXI15023
UniProt: A0A9E6TEJ3
LinkDB
Position
complement(3191951..3193384)
AA seq 477 aa
MSHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFTIPTFDLIVSDLRLPGAPG
TELIKLGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQTVARILRDRQSAQ
VSEPVAGKATNGAVKPGVDNSNGEIGIIGSCPPMQDLYSKIRKVAPTDSNVLIQGESGTG
KELVARALHNLSKRAKEPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAADG
GTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQF
REDLYYRLHVIALKLPALRERGADVNEIATAFLARQSARVNRTDLKFALDAEQAIRHYSW
PGNVRELENAVERAVILCESPEISAELLGIDIELSDLDDDDFIGLPPQQGSAAGNNSHEP
TEDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQRLGIPRRKSTSSNDT
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgtctcatattctgattgttgaagacgaaactattatacgctccgccttgcgccgcctg
ctggaacgtaaccagtaccaggtcagcgaagccggttcagtgcaggaagcacaagaacgt
ttcactattcccacgttcgacctgatcgtcagtgacctgcgcctgcctggcgccccgggg
accgagctgatcaagcttggccagggcacgccggtgcttatcatgaccagttacgccagc
ctgcggtcggcggtcgattcgatgaagatgggcgcggtggattacatcgccaagcctttc
gatcatgacgaaatgctccagaccgtcgcgcgcatcctgcgtgaccggcaatcggcgcag
gtcagcgagccggtcgccggcaaagccaccaatggcgcggtcaaaccgggtgtcgacaac
agcaacggtgaaatcggcatcatcggctcgtgcccgccgatgcaggatctgtacagcaag
atccgcaaagtcgcgccaaccgactccaatgtcctgatccagggcgaatccggcaccggt
aaagaactggtggcgcgcgccctgcacaatttgtccaaacgcgccaaggagccgatgatt
tcggtgaactgtgcggccattccggaaagcctgatcgagtccgaacttttcggccacgaa
aaaggcgcgtttaccggtgccagcgccgggcgtgccgggttggtggaagcggcggatggc
ggcaccttattcctcgatgaaatcggtgaactgccactggaagctcaggcccgcctgctg
cgtgtgttgcaggaaggggagatccgccgggtgggttcggtccagtcgcagaaggttgat
gtacgcctgatcgccgcgactcaccgggacctcaagagcctggcgaagatcggccagttc
cgtgaagacttgtattaccgccttcacgtgatcgccttgaagctgccggcccttcgcgag
cgcggcgcggacgtcaatgaaattgccactgcattcctcgcgcggcagagcgcacgggtc
aaccgtaccgatctgaaattcgccctggatgccgaacaggcgattcggcattactcctgg
ccgggtaacgttcgagagctggaaaacgcagtagaacgtgcggttatcctgtgcgagagc
ccggagatttccgccgagctgctaggtatcgacatcgaactgagcgatctggacgatgac
gatttcattggcctgccgccacaacagggcagcgccgccggtaacaatagccatgagccg
accgaagacctgtcactggaagactactttcagcacttcgttctcgagcatcaggaccac
atgaccgaaaccgagctggcccgcaaactcggggtcagtcgcaaatgcctgtgggaacgc
cgtcaacgtttaggaattccacgtcgtaagtcaacttcatctaatgatacttga

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