Pseudomonas hamedanensis: HU739_017305
Help
Entry
HU739_017305 CDS
T07661
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phv
Pseudomonas hamedanensis
Pathway
phv03030
DNA replication
phv03410
Base excision repair
phv03420
Nucleotide excision repair
phv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU739_017305 (polA)
03410 Base excision repair
HU739_017305 (polA)
03420 Nucleotide excision repair
HU739_017305 (polA)
03440 Homologous recombination
HU739_017305 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phv03032
]
HU739_017305 (polA)
03400 DNA repair and recombination proteins [BR:
phv03400
]
HU739_017305 (polA)
Enzymes [BR:
phv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU739_017305 (polA)
DNA replication proteins [BR:
phv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HU739_017305 (polA)
DNA repair and recombination proteins [BR:
phv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HU739_017305 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU739_017305 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QXI15667
UniProt:
A0A9E6TF86
LinkDB
All DBs
Position
4006125..4008926
Genome browser
AA seq
933 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVDGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYANLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKIDVPLDIGLDDLQMGPEDPAKLYELYSLLEFKSWLNDLDRDAKRLELSA
AVEPAPAADLFSTPEAEAPAPAQAAYETILDQARFDAWLEKLRNARLFAFDTETTGIDAQ
QAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPNKLKVGQHAKFD
MNILANCAIGGDQNDGITVRGIAFDTMLESYVLNSTATRHDMDSLAQKYLDHTTVSFQDI
AGKGAKQLTFDQIALEQAGPYAAEDADITLRLHQTLFDKLSAIPSLASVLTDIEIPLVPV
LARIERQGAFVDAELLGIQSIELGNKMVALEREAFEIAGEEFNLGSPKQLGVILYEKLGL
PVLKKTAKGQPSTAEEVLAKLAEDDHRLPKVLMEHRSMSKLKSTYTDRLPEQINPRTGRI
HTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPKGYKLLAADYSQIELRIMA
HLSKDEGLMNAFRHNLDVHTATAAEVFKVELDQVTSDQRRSAKAINFGLIYGMGAQKLGK
DIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGYVETFFGRRLYLPEINSNKPQE
RAAAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDARVILQVHDELVLEVREDLVEQ
VSAEIRVHMSEAAKLDVPLLVEVGVGHNWDEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcttacctgtatcgcgcctttcac
gcgctgccaccgctgaccacgtccaaaggcctgccgaccggcgcggtcaaaggcgtgttg
aacatgctcaagagtctgcgcaagcagtacccggacagcccgttcgccgtggtgttcgac
gccaagggcgggacgtttcgcgatgagatgtacgccgaatacaaagccaaccgcccgagc
atgcccgatgacatgcgtgtgcagatcgagccgctgcaccagagcgtgatcgccctcggc
ttcccgctgctgtgcgtggacggcgtcgaggccgacgacgtgatcggcaccctcgcccgc
agcagcgcggcggcggatcgcccggtgatcatctccaccggcgacaaggacatggcgcaa
ctggtcgacggccacattaccttggtcaacaccatgtccggtagctcgatggatgtggag
ggcgtgaaggagaaattcggcgtcgcaccggagcagatcatcgattatctggcgctgatg
ggcgattcctccgacaacatcccgggcgtgccgggcattggcccgaagaccgcatccggc
ctgctggttggcgtcaatggtggtctgaccgagctgtacgccaacctcgacatcgtgccg
accctgccgattcgcggcgctaaaaccctgccggccaagctcgaagagcacaaagagatg
gccttcctctcctatcaactggcaaccatcaaaatcgacgtgccgctggacatcggtctc
gatgatttgcagatgggtccagaagatccggccaaactctacgagctgtactccctgctg
gaattcaagagctggttgaacgaccttgatcgtgacgccaagcgcctggaactgagcgcg
gctgtcgagcctgcgccggccgccgatctgttcagcacgccagaagccgaagcgcctgcc
cccgctcaagccgcgtacgaaaccatcctcgatcaggcacgcttcgacgcctggctggaa
aaactgcgtaacgccagactcttcgccttcgacaccgaaaccaccggcatcgacgcgcag
caggcgcaactggtcggtctatcgttcgccgtgcaggccaacgaagccgcctacatcccg
ctgacccactcctacattggcgtgcctgagcaactggatcgcgacaccgtgctgcgcgca
ctcaaaccgattctcgaagacccgaacaaactcaaggtcggccagcacgccaagtttgac
atgaatattctggccaactgcgccatcggcggcgatcagaacgacggcatcaccgtgcgc
ggcatcgccttcgatacgatgcttgaatcctatgtgctcaactccaccgcgacccgtcat
gacatggacagcctcgcgcagaaatacctcgaccacaccacggtgagtttccaggacatc
gccggcaaaggcgccaagcagctcacctttgaccagatagccctggaacaggccgggccg
tatgccgccgaagacgccgatatcaccctgcgtctgcaccagactctgtttgacaagctc
agcgccatcccgagcctggcgagcgtgctgaccgacatcgagattccgctggtgccggtg
ctggctcgtattgaacgccagggcgcgttcgtcgatgccgaactgctgggcatccagagc
atcgagctgggcaacaagatggtcgcgctggagcgtgaagcgttcgagatcgccggggaa
gaattcaacctcggctcgcccaagcagttgggggtgattctctacgaaaaacttggcctg
ccggtgctgaagaaaaccgccaagggccagccatccaccgccgaagaagtgctggcgaag
cttgccgaggacgatcaccgcttgccgaaggtgctgatggagcaccgctcgatgagcaag
ctgaaaagcacctacaccgaccgcctgccggagcagatcaacccgcgcaccgggcgcatc
cacacctcgtatcatcaagccgtcgcctcgaccgggcgcctgtcctccagcgatccgaac
ctgcagaacattccggtgcgcaccgctgaaggccgacgtattcgtcaggctttcatcgcc
cccaagggctacaaactgctggcggcggactattcgcagatcgaactgcggatcatggcg
catctgtccaaagacgaaggtttgatgaacgccttccgccacaacctcgacgtgcacacc
gccaccgcggcggaagtgttcaaggtcgagctcgaccaagtgacctccgaccagcgccgc
agcgccaaggcgatcaacttcgggctgatctacggcatgggtgcgcagaagctcggcaag
gacatcggcgtcgacaccaagaccgccaaggcttacatcgacacttatttcgcccgttat
ccgggggttcgcgagtacatggaccgcacccgcgcgcaagcggcggatcagggttacgtc
gaaacgttcttcggtcgccgcctgtacttgccggagatcaattcgaacaagccacaggaa
cgcgccgctgctgaacgcacagcgatcaatgcgccgatgcagggcacggcggccgacatc
atcaagaaagccatggtggctgtggataactggctggcaacgtccgggctggatgcccgg
gtgatcctgcaggtccacgatgaattggtactggaggttcgcgaagatctggtcgagcag
gtcagtgccgaaatccgcgtgcacatgagcgaggcggcgaagctggatgtgccgttgctg
gtcgaagtgggcgtgggccacaactgggatgaggctcactaa
DBGET
integrated database retrieval system
